Gene Spea_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0930 
Symbol 
ID5661329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1138130 
End bp1139047 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content44% 
IMG OID641235475 
Producthypothetical protein 
Protein accessionYP_001500792 
Protein GI157960758 
COG category[S] Function unknown 
COG ID[COG2035] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATTATT TACAGACCTA CCTTAAAGGT ATGGCAATGG GCGCAGCGGA TGTGGTGCCT 
GGTGTTTCCG GTGGTACTAT CGCCTTTATT ACGGGTATCT TGGACCCACT ACTGGAAAGC
ATTAAAAAAA TTAGACCCTC TTTACTGGGC GTGATTAAAG AGAACGGAGT TAAAGCGGCC
TTTATGCATA TTAATGGTCC GTTTTTAGTC TGTGTGTTTG GTGGTATTTT GACCAGTATT
TTAACTTTGG CTAAGTTGAT TACTTATCTG TTGGAGAATC ACCCTATTCC AGTATGGTCG
TTCTTTTTTG GTCTTATCTT GATCTCGGTC ATTCATATGC TCAAGCAAGT TAAGGGCTTT
ACACTTGGGC GTATAGCCTT ATTTGCCTTG GGAGTCGTGT TTGCTTGGGG CATTACCATG
TTAAACCCGA TTGCGGTTGA GATGACCTAT CTGAATGTGT TCTTGGGCGG CTGTATTGCC
ATTACCGCGA TGATCTTACC TGGCATTTCG GGTAGCTTTA TCTTGCTGTT ACTTGGCTTA
TATACCCCAG TGATTGGCGC GGTTAAGAAT TTTGACCTCG CAATTATGGC TACCTTTGCC
GCTGGTGCCG CTATCGGCAT ACTCTGCTTT AGCCACGTAT TGTCAGCACT GCTAAGAAAG
TATCACGATG CGACATTGAT GTTTTTAATT GGCTTGATGC TTGGAACATT AGGCAAGATC
TGGCCTTGGA AAGAGGTGCT AACTTTTCGT GAAAACTCAA AAGGCGAAAT GGTACCACTC
GATGAGCGCG TGTTATCGCC CCTGCAGTAT GAGCATATAA CCGGTCAGCC TTCATTGCTA
ATGTATGCGG TTACCGCCAT GTTTGCCGGT ATTTTATTAG TATGGGGCTT AGAGCGATTT
GCTAATAAAA CACGTTAA
 
Protein sequence
MNYLQTYLKG MAMGAADVVP GVSGGTIAFI TGILDPLLES IKKIRPSLLG VIKENGVKAA 
FMHINGPFLV CVFGGILTSI LTLAKLITYL LENHPIPVWS FFFGLILISV IHMLKQVKGF
TLGRIALFAL GVVFAWGITM LNPIAVEMTY LNVFLGGCIA ITAMILPGIS GSFILLLLGL
YTPVIGAVKN FDLAIMATFA AGAAIGILCF SHVLSALLRK YHDATLMFLI GLMLGTLGKI
WPWKEVLTFR ENSKGEMVPL DERVLSPLQY EHITGQPSLL MYAVTAMFAG ILLVWGLERF
ANKTR