| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0929 |
|---|
| Symbol | |
|---|
| ID | 5661328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 1137456 |
|---|
| End bp | 1137956 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641235474 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001500791 |
|---|
| Protein GI | 157960757 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGCG ATCTAAATAC TAATAATAAG CCCACCAAAG TCATGTCACT CTATAACCGT
GTCACTCGAT TGCCATTTGG TCACAAGATT TTCTCACTTA TGGTGAGCCG CATGGCGCCT
TACTTCGGTA CAGTAAAACC CATCATAAGT GAATTAAATG TGAATCGCTG TGTCTGCCAG
ATAAAGAAAC GCAAGGCGGT GCACAATCAT ATTCAGACGG TACATGTGAT TGCTATCTGT
AACGGACTAG AGATGGCGAT GGGCGTAATG GCTGAAGCAT CTATTCCTCA TCACTTAAGG
TGGATCCCTA AAGGGATGAG CGTAGACTAC ACCGCCAAAG CTGGCAGTGA TATAACCTGT
ATTGCCGAAG TTGAGCCTGA ACAGTGGGTG CCCGGTGACA TGCTAGTGCC CGTTACCGCC
TATGACACCG ATGGAGTAGT GGTTGTACGA GGCACGATTA AACTGTGGAT TTCAGAAAAA
CCCGCCAAGA AACCATCTTA G
|
|---|
| Protein sequence | MMSDLNTNNK PTKVMSLYNR VTRLPFGHKI FSLMVSRMAP YFGTVKPIIS ELNVNRCVCQ
IKKRKAVHNH IQTVHVIAIC NGLEMAMGVM AEASIPHHLR WIPKGMSVDY TAKAGSDITC
IAEVEPEQWV PGDMLVPVTA YDTDGVVVVR GTIKLWISEK PAKKPS
|
|---|
| |