| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0925 |
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| Symbol | |
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| ID | 5661324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1133508 |
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| End bp | 1134908 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235470 |
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| Product | Ig domain-containing protein |
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| Protein accession | YP_001500787 |
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| Protein GI | 157960753 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGATAT TTAAACAGCT ACAACGTCTG TTGATGTTAT TCACATTGCT CGTTATCGCT
GGTTGTGGCG GCGATGACGA TGGTTTTCCT ACGGGAGCCT GTGGTGGCCC CGATAATCCA
TGCCCTGCCT ATGCAATGGC TCTAGATATA ACACCTGAGC TAAATACGCT GGCACTCAAT
ACAAGCGATA ATTATTCGGC AATAGTGACC TACAGTGACG GAACGAGCAA GGATGTGACG
CAAGCAGTTA CCTGGTCGAC GGCTGAACAA CAGATAGCCA CAGTATCGCA AGGTGGTATC
GCATCCGCCT TGGGCGGCGG GCAGACTCAA GTTATGGCCA CCTTTGCATC AGAGCTGCAA
GGTGGAGAGC CCCTAACCGA TATCGCGACT CTAATTGTAA CTGATGCGCC ATTAACGCAT
TTGAGTGTTC GGCCCGGGCA AGCTGAAATA TTGGTTGGAT TGACGCAAGC ATATAGTGCA
TTAGCATCGT TTTCTGATGG ACATCAGCAA GATGTCACTA ATGATGTTAA ATGGGGGGTG
ATGCATAGTG CCATAGCAGG TATATCCAAT GAAGTTAACT CGAAAGGGGT TGCGACAGGG
CTCAACCAAG GTGTAACACA AGTGAGCGCG AGTTTTAAAC AACAGAGCGC ACTGGCAAGC
TTGGTTGTTT TAGATGCACA GCCTGCAGCA TTAATTATCT TTCCGCTAGA TCAAGCTTTA
CCTCGAGGAA CGAGTCTGCA GTATCAAGCC TATCTGCAAC TTGATGACGG TAATAGTATC
GATGTCACAG CTCAGTCGAC TTGGCAGACA GCCACACCTG AAATAGCTTC TATCGACAGT
AAGGCGTTTC TTACAGGCAA TGAACTTGGC ATCACAAATG TTAACGCAAC GCTTAATTAC
GCAGATGTGA GCCTTAATGA CAGCACAAGC GTTAATGTTA TTGCTGCACA ACTTGAAGAC
TTAGTCGTGA CGCCTACAGA AGGTGTGTAT CCCAAAGGCA CTATGGGAAC ATATCAAGCC
AGCGCATACT TTTCCGATGG TCAAGTTATC GATGTAACTC GCAATGCAAC TTGGTCAACA
TCAAATCAAG CTGTGATCAT AATAACGCAA ACGGGGGCGA GTGCGGGTAA TGCTTTAGCC
GCCGAAGTTG GCGAAGCCCG TGTTACTGCT AGCTACGACT CATTAACTGC ATCTGCGGAC
GCAAAAGTGA CCGATGCTGT TGTTATCGAA CTTAATATTT CCCCCATGAT AAAACTATTC
CAGCGGGTCT CAAGCAACCC TATCAAGCCT TCGCAAGCTT CTCTGATCAT ACAAGTAAAA
ATGTCACCCT TGAAGCTCGT TGGACAAGCT CAAAGCTTGA TATTGCCGCT GTTGATGAGC
AGGGAATTGC TTATACGATA A
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| Protein sequence | MLIFKQLQRL LMLFTLLVIA GCGGDDDGFP TGACGGPDNP CPAYAMALDI TPELNTLALN
TSDNYSAIVT YSDGTSKDVT QAVTWSTAEQ QIATVSQGGI ASALGGGQTQ VMATFASELQ
GGEPLTDIAT LIVTDAPLTH LSVRPGQAEI LVGLTQAYSA LASFSDGHQQ DVTNDVKWGV
MHSAIAGISN EVNSKGVATG LNQGVTQVSA SFKQQSALAS LVVLDAQPAA LIIFPLDQAL
PRGTSLQYQA YLQLDDGNSI DVTAQSTWQT ATPEIASIDS KAFLTGNELG ITNVNATLNY
ADVSLNDSTS VNVIAAQLED LVVTPTEGVY PKGTMGTYQA SAYFSDGQVI DVTRNATWST
SNQAVIIITQ TGASAGNALA AEVGEARVTA SYDSLTASAD AKVTDAVVIE LNISPMIKLF
QRVSSNPIKP SQASLIIQVK MSPLKLVGQA QSLILPLLMS RELLIR
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