Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0924 |
Symbol | |
ID | 5661323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1132435 |
End bp | 1133505 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641235469 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001500786 |
Protein GI | 157960752 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAC TGAGTTTGAA GGCTAATGTC TCCATTGTTT TTTTTACTCT GCTATATCAG TCTCTAGGCT CAGTTTATGC GGCAGAAGCT GATAGTTCTG AACCTGCAAA TGAATTCGCC CCTTATTTTT ACCTCGGGGC AAAGGCCGGT CAGATGCATT ATCAAAATGC TTGTGAAAGT TGGAGCGTAA GTTGTGACGG TAATTATGTT GGTTTTGGTG GTTTTGCTGG TTACCAAGCG TGGCAGTATC TGGGTTTTGA GACAGCTTAC CTCGATTTAG GCGAAGCAGT CTCTGGCTAC TCAGAAAGTG CCGTCAACAA TACTTATGTT GGCAGCATGA AAGGTTGGGA GCTATCGGCG GTAACTCGGT TTGGTTTAAG TGAAGATTTT GAGCTATTTG CAAAGGCGGG AAGTTTTTAT TGGGATGGTG ATAATCAAGG TCCTTATAGC CGTAATTCAG ACTCAGGTTG GGCCCCAATG CTAGGAGCTG GATTAGCGTA TCAGATATCG CCTTCATGGG TAGCACGACT CGAATATCAG TATATCGATA AGCTAGGTAG TGACCTAATA GGTGGTAGCA ATGGTCACTT AACGACGTTA GGTATTAGCT ATCGCTTCGG TCAAAAAAAG CCTGCAAGTG TATCGCAGGT AAAGGAAAAG CCGATTACAT TGCCTGAGAA AGTTATTCCT GTAACAGCTA AGCCGGTTGT GTTCCCAGCA TTAACGGTAA CCAGCTTATT TGATTTTGAT AGCAGCGAGT TAACCAATTC AGACTCTTTA ACAGCGGTGA TTGAACGACT AAATCAAGTA CCAACAGCTA TAGCGAACAT TAAAGGGTAT ACCGACTCCA CAGGTGCCGC AGCTTATAAT CAAGCCCTAT CGGAGCGTAG GGCTCAAGCT GTCGCCGACG ATTTAATTGC GGCGGGCATA AAACCCGAGC AGATAGAGGT GCATGGGTTT GGTGAGCAAT TCCCGGTAAT GAAAAACGAT ACTTCTGAGC ATCGCCATGA AAACCGCCGA GTGTTAATAC ACATCCAATC AACGACATCA GAAATGAAGC CGGAGATCTA A
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Protein sequence | MFKLSLKANV SIVFFTLLYQ SLGSVYAAEA DSSEPANEFA PYFYLGAKAG QMHYQNACES WSVSCDGNYV GFGGFAGYQA WQYLGFETAY LDLGEAVSGY SESAVNNTYV GSMKGWELSA VTRFGLSEDF ELFAKAGSFY WDGDNQGPYS RNSDSGWAPM LGAGLAYQIS PSWVARLEYQ YIDKLGSDLI GGSNGHLTTL GISYRFGQKK PASVSQVKEK PITLPEKVIP VTAKPVVFPA LTVTSLFDFD SSELTNSDSL TAVIERLNQV PTAIANIKGY TDSTGAAAYN QALSERRAQA VADDLIAAGI KPEQIEVHGF GEQFPVMKND TSEHRHENRR VLIHIQSTTS EMKPEI
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