| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0921 |
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| Symbol | |
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| ID | 5661320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1128794 |
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| End bp | 1129981 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641235466 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001500783 |
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| Protein GI | 157960749 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.181611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTTA ATGTTTGGCT ATTAACACTA GCACAGGCGT TTGCCATGAG TGCCACTCCT
ATGATGATGT TACTCGGAGG ATTGATTGGC GCCCAAATTG CGCCGTCGCC TGAGTTAGCG
ACTCTGCCGA TAGCCTCTAT GGTGGTAGGA CTTGCCTTGT CGGTGCTGCC TGTATCTAGG
TTGATGCAGC GCTTTGGTCG CAAGCCTGTG TTTGTTGGCG GGGCGTTGCT GGCAGCCAGT
TCTGGGCTTG TTGCAGCGCT GGCGACGTCG GAGCAAAACT TTATCTTATT TTGTTTGAGT
GGCGTGATGC TAGGTTCGGC GGGGGCTGTA GTGCAACAAT ATCGTTTTGC GGCAATGGAG
TCGGTAAGTG AGGAACTGGT GGCAAAGGCC GCCTCTAGAG TCTTGCTTGG GGGGCTTGCT
GCTGCCGTTA TCGGGCCTGA ATTAGCCGTT TGGGGTAGCC TGCTTTGGCA ACAAACATAT
GTGGGAGCAT TTTTGTTGCT GACGTTAGTG AGCCTAGTTG CGGCGGTGAT TTTGAGCTTC
TATCGTGAGC CGAAATGCGA AACAAGCAGT GACTCTCAGC GAGTGGAAAA TAATGCCCGT
TCGCTAACGG AGATTTTAGC GCAGCCACAA CTTTGGGTGG CAATTGCGGG AGCGACTCTA
GGTTATGCCA TGATGAGCTT TGTGATGACG GCGACACCAC TGCATATGCA TCATGTCGAG
CAGCACTCGC TTGCGGATAC CAAGTGGGTG ATCCAAAGCC ATATTATTGC CATGTACTTG
CCTTCATTAT TTAGCGGAGC CTTGGTGGCT CGCTTGGGTG TCTCCAAGAT GATGCTACTG
GGGTTGCTTG CTTACCTTGT TACCATTATC ACGGCGGTCA TTGGTCGAGA TCTACTTAAC
TATTGGGCCG CCTTGGTATT ACTTGGGATC GGTTGGAACT TCCTCTTTGT GGCGGGGACA
GCCTTGCTAC CTCGTTGTTA TGCGAAGACT GAACGTTACA AGGTGCAGTC TTTTAATGAC
ACCTTTATAT TCGGCGCTCA AGCTATGGCA TCGCTGAGTG CGGGCTGGGT GATCCACCTG
TTAGGTTGGA ATGTTTTGTT GCTAAGCTGC TTACCTCTAA TTGTGGCTCA GGTACTGCTT
ATTACATGGT GGAAATGGAG TAGAACCAAA GCGCTATCAA ATCATTAA
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| Protein sequence | MPFNVWLLTL AQAFAMSATP MMMLLGGLIG AQIAPSPELA TLPIASMVVG LALSVLPVSR
LMQRFGRKPV FVGGALLAAS SGLVAALATS EQNFILFCLS GVMLGSAGAV VQQYRFAAME
SVSEELVAKA ASRVLLGGLA AAVIGPELAV WGSLLWQQTY VGAFLLLTLV SLVAAVILSF
YREPKCETSS DSQRVENNAR SLTEILAQPQ LWVAIAGATL GYAMMSFVMT ATPLHMHHVE
QHSLADTKWV IQSHIIAMYL PSLFSGALVA RLGVSKMMLL GLLAYLVTII TAVIGRDLLN
YWAALVLLGI GWNFLFVAGT ALLPRCYAKT ERYKVQSFND TFIFGAQAMA SLSAGWVIHL
LGWNVLLLSC LPLIVAQVLL ITWWKWSRTK ALSNH
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