| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0911 |
|---|
| Symbol | |
|---|
| ID | 5661310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 1116601 |
|---|
| End bp | 1117716 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641235456 |
|---|
| Product | permease YjgP/YjgQ family protein |
|---|
| Protein accession | YP_001500773 |
|---|
| Protein GI | 157960739 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0795] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000466343 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTGTAT TTAGATACCT GATTCGAGAA GTTTTTAAAG CACAAATAGC GGTACTTTTA
GTGCTGTTAG CTATTTTTAT TAGCCAACAT TTTGTGCGTG TGCTTGCTGA TGCCTCCGAT
GGCGACTTTC CTGCATCTCT TGTTATGACT CTACTCGGTC TTAACATGCC ATTTCTCACC
GTTTTAGTCT TACCGCTAAG TCTATTTTTG GGCATTTTAT TAGCCCATGG GCGTATGTAC
GCCGAAAATG AGATGGTTAT TTTTCATGGC GTCGGCATCA GCGAGTGGTA TATCACTCGG
ATCACTCTGT TGCTTGCCGT GATTAACATG GTGTTTACTG CGTTCCTGTC TATTTATGTC
GCGCCATGGG CGGAAGAGAG GCAGAATCAA GTACTGGAGC ATGCTCAGTC CGAAGCTGGA
CTTGCTGCCT TAACACAGGG CCGCTTCCAG ACTAGCCCTA ACGGCCGTGC CGTGCTGTTT
GTCGAGCGTA TTGGTCGCGA TAATCAATTA GATAAGGTGT TTGTTGCCCA ATTGCCAGAT
CCCGATGACG AAACCGGTGT GGCAAACGTA GTGGTGGCAC GTACCGGTAA AGTGGTCGAA
GATGAAATTG GCGGCCAGCG TCTACAGTTA GAAGATGGGG TGCAGTATCA GGGCAACCCT
AAGCGTGTCG ACTATCAAGT TGTTGAATTT GGTGGTTATC AGATGCAGAT TAAAGAGCAA
GCAGTAGATG AGCGTCGCCG TAAACTGTCT GCCATGCCTA TTGGTCAGCT AATGGATATC
GATAGCCCTG AAGCCACGGC TGAGTTCCAT TGGCGATTGG CGATACCACT GGCAATTCCA
CTGATGACCT TGATTGCTGT GCCTATGGCG CGAGTGAATA ACCGCCAGGG TAAGTTTGCT
AAGATGTTCC CGGCTATTTT GCTGTACTTG GGTTATTTTG GCTTGATGGT AGCGGGGCGT
AAATCACTAG AAGATGGAGT TATTCCTCAG TACTTAGGTA TGTGGTGGAT CCATGCTTCC
GCACTTGCCA TAGGTATATT GCTTTTAGGT AAAGAGCGTC CTTTAGGAGC TAAAGTTTCA
GGCCTATTTA AGCGCAATAA GGCGAGCAAA GCATGA
|
|---|
| Protein sequence | MIVFRYLIRE VFKAQIAVLL VLLAIFISQH FVRVLADASD GDFPASLVMT LLGLNMPFLT
VLVLPLSLFL GILLAHGRMY AENEMVIFHG VGISEWYITR ITLLLAVINM VFTAFLSIYV
APWAEERQNQ VLEHAQSEAG LAALTQGRFQ TSPNGRAVLF VERIGRDNQL DKVFVAQLPD
PDDETGVANV VVARTGKVVE DEIGGQRLQL EDGVQYQGNP KRVDYQVVEF GGYQMQIKEQ
AVDERRRKLS AMPIGQLMDI DSPEATAEFH WRLAIPLAIP LMTLIAVPMA RVNNRQGKFA
KMFPAILLYL GYFGLMVAGR KSLEDGVIPQ YLGMWWIHAS ALAIGILLLG KERPLGAKVS
GLFKRNKASK A
|
|---|
| |