| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0902 |
|---|
| Symbol | |
|---|
| ID | 5661301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 1103072 |
|---|
| End bp | 1103563 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641235447 |
|---|
| Product | DNA polymerase III chi subunit HolC |
|---|
| Protein accession | YP_001500764 |
|---|
| Protein GI | 157960730 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2927] DNA polymerase III, chi subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCCAA GTCAGTCTCA AGCTCAGTTT TATCTGATGC CAAAGGATGC ACTGCAAGCA
TCTAACGCGC CCAAATCGGC ACTTGAGCAA GTGTATTTGC TTGCCTGCCA ATTGGCGCAG
CGAGCCTTTG CCACTCAGCA ACTGGTCTAC GTTCATTGCC AAGATCAACA GCAAGCTTAT
GCGATTGATG AACTCTTATG GCAATTTGAG CCACAATCTT TTGTGCCCCA CAACCTTAAA
GGTGAAGGTA CATTAGGCGG CGCGCCGGTA GAAATTGGCT TTGACAGACT TGGAGCCAAC
AAAAAACGTC ATCTTCTGAT TAATCTTGCA GACCAAGTGC CGCAATTTGC GGTAAACTTT
GGACAGATTA TCGATTTCGT TGCTAACGAC GATAGCCATA AAGCGATTGC TCGCGATCGC
TACAGACAGT ATCGCGCACT TGGGATAGCT CTAACGACCC AAGATATAGC AACACAACCT
ATTAATTTTT AG
|
|---|
| Protein sequence | MSPSQSQAQF YLMPKDALQA SNAPKSALEQ VYLLACQLAQ RAFATQQLVY VHCQDQQQAY
AIDELLWQFE PQSFVPHNLK GEGTLGGAPV EIGFDRLGAN KKRHLLINLA DQVPQFAVNF
GQIIDFVAND DSHKAIARDR YRQYRALGIA LTTQDIATQP INF
|
|---|
| |