| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0878 |
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| Symbol | |
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| ID | 5661277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1077195 |
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| End bp | 1077908 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641235423 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001500740 |
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| Protein GI | 157960706 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00260237 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAACT CTCAATCTAC GCATAGAGTT TTGTTAGTTG AAGATGATAT TCGTTTGGCC
AATTTGATTG TCGATTTCCT AAAATCACAT GGCATGCACG TCGAAGTAGA GCGTAGAGGC
GACACAGTTT TAACCCGCCT AATAAACTAT AAGCCTGACA TTATTTTGCT TGATATCATG
TTGCCAGGCA TGGACGGTTT AACCCTATGT GAAAAGCTAC CAGACTACTT TGCCGGCCCT
ATCCTGTTAA TGAGCGCCCT AGGTTCAAAT GAAGACCAGA TTAAGGGCTT AGAGTTAGGC
GCAGATGATT ATGTCGTTAA GCCTGTCGAT CCCGCTTTAT TAGTTGCGCG TATCAATAAT
TTATTACGCC GACAAGCAAA GCCCGCACAA GTAGAGTCCC ACTGCCTCAG CTTTGGTAAA
TTGAGCATAG ATCCGCACAC TCAAGCCATT CGTTTGGGTG AAACAGAGGT CGATCTAACT
AGTCACGAAT TTGAACTACT ATGGCTGCTT GCATCACAGG CAGGACAAGT AATGAGTCGT
CAGTATATCT ATCAATACCT GCTCAATATC GATTTTGATG GTAAGGATAG AAAGATTGAT
GTGCGTATCT CTCGTCTAAG AAAGAAACTT GGCGATAATA TTGAAACGCC ATTTAGAATT
AAGACGGTAT GGGGCCAAGG TTACCTATTC GCACCAGAAG CATGGAATAA CTAA
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| Protein sequence | MTNSQSTHRV LLVEDDIRLA NLIVDFLKSH GMHVEVERRG DTVLTRLINY KPDIILLDIM
LPGMDGLTLC EKLPDYFAGP ILLMSALGSN EDQIKGLELG ADDYVVKPVD PALLVARINN
LLRRQAKPAQ VESHCLSFGK LSIDPHTQAI RLGETEVDLT SHEFELLWLL ASQAGQVMSR
QYIYQYLLNI DFDGKDRKID VRISRLRKKL GDNIETPFRI KTVWGQGYLF APEAWNN
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