Gene Spea_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0870 
Symbol 
ID5661269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1069095 
End bp1070048 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content47% 
IMG OID641235415 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001500732 
Protein GI157960698 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0719335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTG TTGTGCTCGA CGGATATACG TTAAATCCAG GTGATCTCGA TTGGCAAGCA 
TTAGCAGCGT TTGGAGAGCT AAGCGTCTTC GAACGTAGCG CGCCTGAAAA GGTACTCATC
CGTAGTCAGG ATGCAGAGAT TATCTTTACC AATAAGACAG TGCTCGATGC CGCAACATTA
AGGCAACTGC CTAAGCTTAA GTATATCGGC GTCCTTGCTA CAGGCACCAA TGTGGTCGAT
CTCGAGACTG CAAAAGAGCT GGGAATAGTG GTCACCAATG TGCCCGGTTA CGGTCCCGAT
GCGGTCGCAC AGATGGTGTT TGCTCATATA CTCCATGCCA CGCAGCAGGT TGCTTTGCAC
TCTGACGCTG TAAAGCGCGG GATCTGGAGT GAGTCGAAAG ATTTTTGCTT TACACTTACG
CCGCTGCAAT CGTTAAAGGG CAAACGTTTA GGTTTAATCG GTTTTGGTGA TATAGGTAAA
GTGGTTGCTC AAATTGGGCT GGCCTTTGGT ATGGCGGTAT TGGTCAATAC CCGTAATCCT
AAAATCAAAT TGCCAGAGGG TTGCCGTTGG GCCGAGCGAG AGGTGTTATT TAGTCAGTCA
GATATTATTT CTCTGCACTG TCCGTTCACC CCTGATACCG ATAAATTGAT CGATGCTAGC
GTGCTTGAGA AGATGAAGTC TTCAGCAATC TTGATTAACA CCGCTCGTGG TGGTCTTATC
GATGAAGCTG CATTGTCGGC TGCATTAGAG CTAGGAGCGA TAGCTTTTGC GGGTGTTGAT
GTATTGTCTA CCGAGCCACC ATGCCAAGAT AACCCATTGC TGAGAGCCAA GAATATCAGT
ATCTCGCCCC ATAACGCCTG GGCAACCATA GAAGCTAGGC AGAACTTGCT CAATATAGCA
GTCGATAATC TTTCGAGTTT TAGTCAAGGC CAAGTGAAAA ACCGAGTTAA TTGA
 
Protein sequence
MKLVVLDGYT LNPGDLDWQA LAAFGELSVF ERSAPEKVLI RSQDAEIIFT NKTVLDAATL 
RQLPKLKYIG VLATGTNVVD LETAKELGIV VTNVPGYGPD AVAQMVFAHI LHATQQVALH
SDAVKRGIWS ESKDFCFTLT PLQSLKGKRL GLIGFGDIGK VVAQIGLAFG MAVLVNTRNP
KIKLPEGCRW AEREVLFSQS DIISLHCPFT PDTDKLIDAS VLEKMKSSAI LINTARGGLI
DEAALSAALE LGAIAFAGVD VLSTEPPCQD NPLLRAKNIS ISPHNAWATI EARQNLLNIA
VDNLSSFSQG QVKNRVN