Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0870 |
Symbol | |
ID | 5661269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1069095 |
End bp | 1070048 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641235415 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_001500732 |
Protein GI | 157960698 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0719335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTG TTGTGCTCGA CGGATATACG TTAAATCCAG GTGATCTCGA TTGGCAAGCA TTAGCAGCGT TTGGAGAGCT AAGCGTCTTC GAACGTAGCG CGCCTGAAAA GGTACTCATC CGTAGTCAGG ATGCAGAGAT TATCTTTACC AATAAGACAG TGCTCGATGC CGCAACATTA AGGCAACTGC CTAAGCTTAA GTATATCGGC GTCCTTGCTA CAGGCACCAA TGTGGTCGAT CTCGAGACTG CAAAAGAGCT GGGAATAGTG GTCACCAATG TGCCCGGTTA CGGTCCCGAT GCGGTCGCAC AGATGGTGTT TGCTCATATA CTCCATGCCA CGCAGCAGGT TGCTTTGCAC TCTGACGCTG TAAAGCGCGG GATCTGGAGT GAGTCGAAAG ATTTTTGCTT TACACTTACG CCGCTGCAAT CGTTAAAGGG CAAACGTTTA GGTTTAATCG GTTTTGGTGA TATAGGTAAA GTGGTTGCTC AAATTGGGCT GGCCTTTGGT ATGGCGGTAT TGGTCAATAC CCGTAATCCT AAAATCAAAT TGCCAGAGGG TTGCCGTTGG GCCGAGCGAG AGGTGTTATT TAGTCAGTCA GATATTATTT CTCTGCACTG TCCGTTCACC CCTGATACCG ATAAATTGAT CGATGCTAGC GTGCTTGAGA AGATGAAGTC TTCAGCAATC TTGATTAACA CCGCTCGTGG TGGTCTTATC GATGAAGCTG CATTGTCGGC TGCATTAGAG CTAGGAGCGA TAGCTTTTGC GGGTGTTGAT GTATTGTCTA CCGAGCCACC ATGCCAAGAT AACCCATTGC TGAGAGCCAA GAATATCAGT ATCTCGCCCC ATAACGCCTG GGCAACCATA GAAGCTAGGC AGAACTTGCT CAATATAGCA GTCGATAATC TTTCGAGTTT TAGTCAAGGC CAAGTGAAAA ACCGAGTTAA TTGA
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Protein sequence | MKLVVLDGYT LNPGDLDWQA LAAFGELSVF ERSAPEKVLI RSQDAEIIFT NKTVLDAATL RQLPKLKYIG VLATGTNVVD LETAKELGIV VTNVPGYGPD AVAQMVFAHI LHATQQVALH SDAVKRGIWS ESKDFCFTLT PLQSLKGKRL GLIGFGDIGK VVAQIGLAFG MAVLVNTRNP KIKLPEGCRW AEREVLFSQS DIISLHCPFT PDTDKLIDAS VLEKMKSSAI LINTARGGLI DEAALSAALE LGAIAFAGVD VLSTEPPCQD NPLLRAKNIS ISPHNAWATI EARQNLLNIA VDNLSSFSQG QVKNRVN
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