Gene Spea_0854 details

Gene Information

• Locus tag: Spea_0854
• Symbol: obgE
• ID: 5661253
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 1052958
• End bp: 1054121
• Gene Length: 1164 bp
• Protein Length: 387 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 641235399
• Product: GTPase ObgE
• Protein accession: YP_001500716
• Protein GI: 157960682
• COG category: [R] General function prediction only
• COG ID: [COG0536] Predicted GTPase
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR02729] Obg family GTPase CgtA

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0000429069
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTTTG TCGATGAAGC TATTATCCGT GTAGAAGCCG GAAATGGTGG CAGTGGTTGC 
GTTAGCTTTA GACGCGAAAA ATATGTTCCT GATGGTGGTC CTGACGGTGG TGATGGTGGT 
GACGGCGGTA GTGTATATCT ACAAGCCGAT GAAAACTTGA ACACATTGAT CACTTATCAG 
TTTGAACGCT TCCATATTGC CGAGCGCGGT AAGAATGGTC GTGGGCGTGA TTGTACTGGT 
CACGGCGGTG AAGACTTGAT CCTTAAAGTG CCGGTTGGTA CTCGCGCTAT CGATAACGAT 
ACTGAAGAGT CACTTGGTGA CTTAACCACT CACGGGCAAA AATTGCTTGT GGCTAAAGGT 
GGTTTCCATG GTCTAGGTAA TACTCGTTTC AAGAGTAGTA CTAACCGTGC GCCAAGACAG 
AAAACCTTAG GTACTGACGG TGAAGTGCGT AGCTTAAAGC TAGAGCTATT ACTGTTAGCC 
GATGTAGGCC TACTTGGTAT GCCGAATGCG GGTAAGTCAA CCTTCATTCG CTCTGTATCG 
AAGGCTAAGC CAAAGGTTGC CGATTATCCA TTTACCACTT TGGTCCCTAA CCTAGGTGTT 
GTTAATCCTA GACCAGGTCA GAGCTTTGTA ATTGCGGATA TTCCAGGGCT TATCGAAGGC 
GCTGCTGATG GTGCAGGTCT TGGTGTACAG TTCCTAAAGC ATTTAGAACG TTGCCGTGTG 
TTGTTACACA TTTTGGACGT TGAGCCTATC GATGGTAGCG ATCCAGTTGA AGCTGCTCGT 
GCAATCGTTG CTGAGCTTGA AAAGCACTCT CCTAAGCTTG CGGGTAAGCC ACGTTGGTTA 
GTAATCAACA AAGCTGACTT GATGTTGCCA GAAGAGCTAC AAGAACGTAT TGACCGTATC 
GTTAAAGAGT TAGAGTGGGA AGGTGATATT TACACTATTT CTGCTTATAA CCGTGAAGGT 
ACTGCTGAGT TAGCCCTTAA GTTATTAGAC TTTATCGATT CACTTCCTCC TGAAGAAGAA 
GTTGATGCTG ATGCTGAAGT CGAATTTAAG TGGGATAACT ATCATCAGAA TGCAAATGAT 
TCTATTAACG AAGATTTTAA CGACGATTTC GATGATGATT TCGACGAAGA TGATTACGAT 
GTAGAGATTA TCTACCAAAG ATAA 

 

Protein sequence

MKFVDEAIIR VEAGNGGSGC VSFRREKYVP DGGPDGGDGG DGGSVYLQAD ENLNTLITYQ 
FERFHIAERG KNGRGRDCTG HGGEDLILKV PVGTRAIDND TEESLGDLTT HGQKLLVAKG 
GFHGLGNTRF KSSTNRAPRQ KTLGTDGEVR SLKLELLLLA DVGLLGMPNA GKSTFIRSVS 
KAKPKVADYP FTTLVPNLGV VNPRPGQSFV IADIPGLIEG AADGAGLGVQ FLKHLERCRV 
LLHILDVEPI DGSDPVEAAR AIVAELEKHS PKLAGKPRWL VINKADLMLP EELQERIDRI 
VKELEWEGDI YTISAYNREG TAELALKLLD FIDSLPPEEE VDADAEVEFK WDNYHQNAND 
SINEDFNDDF DDDFDEDDYD VEIIYQR