Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0853 |
Symbol | rpmA |
ID | 5661252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1052566 |
End bp | 1052820 |
Gene Length | 255 bp |
Protein Length | 84 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641235398 |
Product | 50S ribosomal protein L27 |
Protein accession | YP_001500715 |
Protein GI | 157960681 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0211] Ribosomal protein L27 |
TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000152445 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACATA AAAAAGCTGG CGGTTCTACT CGTAACGGCC GCGATTCAGA AAGTAAACGT CTTGGTGTAA AGCGCTTCGG CGGTGAATCA GTTCTAGCTG GTAACATCAT CGTTCGTCAA CGTGGTACTA AATTCCACGC TGGTGTTAAT GTTGGTATCG GTCGTGACCA CACTTTATTC GCACTTACCG ATGGTAAAGT GAAGTTTGAA GTTAAAGGTC CTCAGAACCG TAAGTTCATC AGCATCGAAG ATTAA
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Protein sequence | MAHKKAGGST RNGRDSESKR LGVKRFGGES VLAGNIIVRQ RGTKFHAGVN VGIGRDHTLF ALTDGKVKFE VKGPQNRKFI SIED
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