Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0849 |
Symbol | |
ID | 5661248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1049159 |
End bp | 1049629 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641235394 |
Product | arginine repressor |
Protein accession | YP_001500711 |
Protein GI | 157960677 |
COG category | [K] Transcription |
COG ID | [COG1438] Arginine repressor |
TIGRFAM ID | [TIGR01529] arginine repressor |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAGCTA GTAGAAGCCC AGATGATTTA GTTAAGACTT TCAAATCTAT TTTAAAAGAG GAACGATTTG GTTCCCAAAG TGAAATAGTT AACGCCCTAC AAGCTGAGGG CTTTAGCAAT ATCAACCAAT CTAAAGTATC TCGTATGCTA AGCAAGTTTG GTGCGGTTAG AACCCGTAAC GCTAAACAAG AGATGGTTTA TTGCCTCCCA GCAGAGCTAG GCGTGCCTAC TGCTGGCAGC CCGCTTAAAA ACCTAGTACT AGATGTTGAC CATAACCAGT CTATGATTGT TGTCAGAACC AGCCCTGGCG CTGCACAATT AATCGCTCGT CTACTTGATT CAATAGGTAA GCCTGAAGGT ATTTTAGGTA CCATTGCTGG TGATGATACG ATTTTCATCT GCCCATCTAG TATCCATAGT ATTGAAGACA CATTAGAAAC GGTTAAGTCA TTATTTAATT ACGCCGACTA A
|
Protein sequence | MQASRSPDDL VKTFKSILKE ERFGSQSEIV NALQAEGFSN INQSKVSRML SKFGAVRTRN AKQEMVYCLP AELGVPTAGS PLKNLVLDVD HNQSMIVVRT SPGAAQLIAR LLDSIGKPEG ILGTIAGDDT IFICPSSIHS IEDTLETVKS LFNYAD
|
| |