Gene Spea_0848 details

Gene Information

• Locus tag: Spea_0848
• ID: 5661247
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: -
• Start bp: 1048431
• End bp: 1048895
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 641235393
• Product: cupin 2 domain-containing protein
• Protein accession: YP_001500710
• Protein GI: 157960676
• COG category: [S] Function unknown
• COG ID: [COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAATA TAATAAATAT CAATGATATA TGCTGGGAAC CTTGGCAGCA TGAAGATAAA 
TATGCCAGTG AGCAAAAACA CTTAGGTGAC GCGGCTGGCG GCGAAAAAAT CGGTGTGACC 
ATGGAGCGAT TAGCGCCAGG TAAGTCTTCA GCGGTATCGC ATTACCACAC TAAAGAAGAA 
GAGCACATCT ATGCCATGCA TGGAGAAGCA ACGCTTTATA TCGACGATGA GCCTCACTCC 
TTTAGCCAAG GAGAGTATAT CTGCTTCAAT GCTGATACCG GCATTTCTCA CAAACTCGTC 
AACCATAGCG ATAAAGACTT TGTGTTTCTT GTCGTCGGAA ACCGAGACAT TCACGACGTA 
GTCGTATATC CAGAAACCAA CAAGGTACTG GTAAAATCTG TCAACGAAAT TTACGCTCGA 
CGCACCACTA ACTATTGGGA TAAAGACGAA GTTGATAGCG AATAA 

 

Protein sequence

MSNIININDI CWEPWQHEDK YASEQKHLGD AAGGEKIGVT MERLAPGKSS AVSHYHTKEE 
EHIYAMHGEA TLYIDDEPHS FSQGEYICFN ADTGISHKLV NHSDKDFVFL VVGNRDIHDV 
VVYPETNKVL VKSVNEIYAR RTTNYWDKDE VDSE