| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0839 |
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| Symbol | |
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| ID | 5661238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1039157 |
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| End bp | 1040929 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641235384 |
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| Product | ABC transporter related |
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| Protein accession | YP_001500701 |
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| Protein GI | 157960667 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000691959 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCCCT CTTTATATTT CGATGGTCCA ATTGGTAAAT TAAATTGGCA TGTGCTGCGC
ATGTTATGGC CTTATCTGAT CGAGTTTAAA CAAAGAGTCG GCTTGGCCTT GCTATGCCTG
GTTATTGCAA AATTGGCCAG CGTAAGCCTG CCGTTTGTTC TTAAAGATCT GGTTGATGGT
CTCTCTAACT CATCTGCCAA GGAGCTGATC TCAGTTCCCA TCTCTTTAGT CATTGCCTAT
GGTTGTATAC GCTTACTGAA CACCATTATT TCAGAGGTGA GAGATACGCT ATTTGGTCGA
GTGACAGAGC GAGCTATCCG CCGTTTAGGG ATGGCGGTGT TTGAACATCT GCATCGTTTG
GATATGGCGT TTCATTTAGA GCGCAGAACC GGTGGGCTAT CGCGAGATAT CGAGCGCGGT
ACCAGTGGCA TGAGCTTCTT GATGCGCTTT ATGGTGTTTA ACATAGTGCC GACAATTCTC
GAAATCATTC TGGTCGTGGG GATCTTATTT TATAACTACG GCTATGCCTT TGCCGGTGTG
ACGCTGATTT CCGTGATGGC CTACGGGGCT TATTCGATCG TAGCTACCGA ATGGCGTACT
GGCTATGTAC GTGATGCAGC TAAAGCCGAC TCGGTCTCTA GTACCCGAGC TATCGATAGT
TTGCTTAACT ATGAAACGGT TAAGTATTTC AATAATGAAC AGTATGAAGC TAAACAGTAT
GATGTGGCTT TAGCGCAATG GGAGGAGGCT AAGCGTAAGA ACCGGCTTTC CTTGTTTGCA
TTAAATGCGG GTCAGGCTTG TATCATCTCG GTGGCGATGA CATTGATGTT AGGTATGGCA
GCGTATGACG TGGTACAAGG CGAGATGACC ATAGGTGATT TTGTATTGAT CAATGCCTTT
ATGATGCAGC TATTTATTCC ACTTAATTTT TTAGGCTTTG TCTATCGAGA GATCCGCGGG
GCCTTTGCCA ATATCGAGAG GATGTTTGAT CTATTGGAGA AAGTACCTTC GATTCAAGAC
TCGGCTGGCG CGAGTAATCA GCTATTGAGT CAAGGTAGGG TGTCATTTGA GCATGTGGGA
TTTAGTTACG ACTCAAGAAA GATTTTAAAT GATGTCAGCT TTACTATAGA GACGGGCCAA
AAAGTAGCAA TCGTTGGTGA TAGTGGCGCG GGGAAGTCGA CACTGGTTAA GCTATTATTT
CGTTTTTATG ATGTGGGCGA TGGGCGGATC TGTATCGATG GCCATGATAT TCGCGCCTTG
ACACAGAGCT GTTTACGCCA AGCCATAGCG ATAGTACCTC AAGATACAGT GCTGTTTAAC
GATACCTTGA TAGAAAATAT TCGTTATGGC CGCCCAGAGG CTACCCGAGA AGAGATAGAT
GCTGCGATTA AGATGGCACA CCTTAGCCAA TTTATTGAGA GTCTACCTGA AGGCGGGGAA
ACGAAAGTTG GCGAACGAGG CCTAAAGTTG TCCGGTGGTG AAAAGCAACG AGTCGCGATT
GCGAGAGCTA TCTTGAAGAA GTCCCCCATC TTAGTTTTCG ATGAGGCGAC TTCATCTTTA
GACAGCCATT CTGAACAGGC AATTTTAACG GCCTTAAAGG AGGTGGCAAA AGGCCATACT
AGCTTAGTGA TAGCGCATCG ACTCTCGACT GTTGTCGATG CCGACCGTAT CATAGTCTTG
AGTAAGGGCA GAGTCGTCGA AACGGGTAAC CATAGTGAGT TACTCGCTGC GAAAGGCTTC
TATGCCAATC TTTGGCGTGT GCAGCAGGAG TAA
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| Protein sequence | MRPSLYFDGP IGKLNWHVLR MLWPYLIEFK QRVGLALLCL VIAKLASVSL PFVLKDLVDG
LSNSSAKELI SVPISLVIAY GCIRLLNTII SEVRDTLFGR VTERAIRRLG MAVFEHLHRL
DMAFHLERRT GGLSRDIERG TSGMSFLMRF MVFNIVPTIL EIILVVGILF YNYGYAFAGV
TLISVMAYGA YSIVATEWRT GYVRDAAKAD SVSSTRAIDS LLNYETVKYF NNEQYEAKQY
DVALAQWEEA KRKNRLSLFA LNAGQACIIS VAMTLMLGMA AYDVVQGEMT IGDFVLINAF
MMQLFIPLNF LGFVYREIRG AFANIERMFD LLEKVPSIQD SAGASNQLLS QGRVSFEHVG
FSYDSRKILN DVSFTIETGQ KVAIVGDSGA GKSTLVKLLF RFYDVGDGRI CIDGHDIRAL
TQSCLRQAIA IVPQDTVLFN DTLIENIRYG RPEATREEID AAIKMAHLSQ FIESLPEGGE
TKVGERGLKL SGGEKQRVAI ARAILKKSPI LVFDEATSSL DSHSEQAILT ALKEVAKGHT
SLVIAHRLST VVDADRIIVL SKGRVVETGN HSELLAAKGF YANLWRVQQE
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