| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0837 |
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| Symbol | |
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| ID | 5661236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1037516 |
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| End bp | 1038571 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641235382 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001500699 |
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| Protein GI | 157960665 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000153494 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTACC AAAATGATGA TGTTCGAATT AATAAGATTA AAGAGTTGTT ACCTCCAATT
GCTATCTTGG AGCGATTTCC TGCAACTGAG AACGCATCGG CTACCGTGTT TAATGCCCGT
GAAAATATCC ATAACATTTT AGCCAAGCAA GATGACAGGC TATTAGTGGT GATTGGCCCA
TGTTCTATTC ATGATCCTGT GGCGGCCCTA GAGTATGGTA AGCGTTTAGT CGAACTGCGT
GAGCGCTATA AAGATCAGCT TGAAATTGTT ATGCGGGTTT ACTTTGAGAA ACCTCGTACA
ACAGTGGGTT GGAAAGGCTT GATTAACGAT CCGTACATGG ATAACAGCTT CAAACTAAAC
GATGGTTTGC GTACAGCAAG AAAATTGTTG TTAGATCTAA ACAATATGGG CTTACCTACA
GCAGGAGAGT TCTTAGATAT GATCACGCCT CAGTACGTAG CCGATCTTAT GTGTTGGGGA
GCCATTGGGG CACGCACAAC TGAGTCTCAA GTTCATCGTG AGTTAGCTTC GGGCCTTTCG
AGTCCAGTAG GCTTTAAGAA TGGTACCGAC GGCACCATAA AGGTGGCGAT CGATGCGATT
GGCGCCGCAA GCGCACCGCA TCATTTCCTG TCTGTGACTA AGTTTGGTCA TTCGGCGATT
GTCGAGACCA AGGGAAATCC CGATTGTCAT ATCATTTTGC GTGGTGGTAA AGAGCCAAAT
TACAGCGCCG AACATGTCGC CGATATCAAT CTACAACTAG AAAAAGCCGG TCTTGCTAAA
AACATCATGA TCGATTTTAG CCATGCCAAT AGCAGTAAGC AGTTCGAACG CCAGATGCTG
GTCGCCGAAG ATGTGGGTGC TCAGATGGCA AATGGCGATA TGTCGATCTT CGGCGTAATG
GTTGAAAGTA ATTTGATTGA AGGTCGTCAG GATCATATTG AAGGCCACTC ACTTTGTTAT
GGCCAAAGTG TGACAGACGC TTGTATTGGT TGGCAAGATT CTGAAAAGCT ATTAGATATA
CTTAACGAGA GTATCGTTAA GCGCAGAAAT CGATAG
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| Protein sequence | MYYQNDDVRI NKIKELLPPI AILERFPATE NASATVFNAR ENIHNILAKQ DDRLLVVIGP
CSIHDPVAAL EYGKRLVELR ERYKDQLEIV MRVYFEKPRT TVGWKGLIND PYMDNSFKLN
DGLRTARKLL LDLNNMGLPT AGEFLDMITP QYVADLMCWG AIGARTTESQ VHRELASGLS
SPVGFKNGTD GTIKVAIDAI GAASAPHHFL SVTKFGHSAI VETKGNPDCH IILRGGKEPN
YSAEHVADIN LQLEKAGLAK NIMIDFSHAN SSKQFERQML VAEDVGAQMA NGDMSIFGVM
VESNLIEGRQ DHIEGHSLCY GQSVTDACIG WQDSEKLLDI LNESIVKRRN R
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