| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0830 |
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| Symbol | |
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| ID | 5661229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1028876 |
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| End bp | 1030588 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641235375 |
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| Product | nitrate/nitrite sensor protein NarQ |
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| Protein accession | YP_001500692 |
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| Protein GI | 157960658 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00637063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG GCAGACTCAC TTCGGCAATT TGGGGCTTCA TGCTCACACT CATTCTATTG
TCGAGTGGCC TAGCTATTTT CGCCATCATC AATTTGTCTT ATAGCCTAGG TGATGCCAGG
GCCATTAACG CCTCAGGTTC GCTACGTATG CAAAGTTACC GACTGATGTT TTATGCAAAC
TCAGGCAGTG AAGGCGCCAA CGACAAAATT AAAGAGTTCG AAAATACACT GCACTCTCAA
GCACTTAAGC AATCAATGGG TTGGTATACT CCTCTGGATT TAAAAGAGAA GTATTTGAGC
GTTATCGATA AATGGCAGGT CATGCGCTAC TACATAGAAT CTGAAAATTC CCGATTATAT
GCTGCGGCGC TAAAAGATTT TGTCGATACA ATCGATCTTT TCGTGCTCGA AACAGAACAA
TATGCAGCCC TAAAACTGAG GTTTTTAGCC GTAAGTCAAA TAACAGGATT AGCATTAATG
CTGTTAATTG CTTTCTTTAC TGTAAGACTC GCAAAACGCA AGGTTGTTAA ACCGCTGCAA
CAATTGATGC AGGCTGCAGA TACAATTTCA CAAGGTAACT TTAATGTAGA GATGCCTAAA
ACAGAGTACC TAGAATTAAG TGCATTAAGC AGTGCTTTGG ACTCTACAGT GAAAAAGCTG
GCTGGTGTTT ACCAAGGGCT TGAGGAACAG GTACAGGAAA AAACCATCGC CTTGACCCGT
GCTAACAACG AATTGACCTT ACTCTACGAT AGCCTAGTGA TGTTACATTC CAGCAAACTC
GACTCTAATA GCTTGACCCT AGCGCTCAAC CAGCTTCAAA CCCACCAGAG TGAGGCCCAT
TTACGCCTGG TCATGGTTCA AGATGGTGAG GTTGTCGACA TCATCAGCAC AGACAACGAT
GGTGATTGGC CGCACAATGG TGAAAACACC CAACAATTCC CATTACAATT TGAGGACAAC
AACTTAGGTT ACTTAGAAGT ACTCTCCTCT AAGCCCTTCT CTTTCCAGCT GTTTAATAAC
TTTGCCATCA TGCTTGCCCG CTCTATGGTG ATCTATAATG CAGGTGAGCA GCGTCAGCAA
CTCGCCCTTA TGGAAGAGCG TGGCGTGATT GCCAGAGAGC TACATGACTC CCTTGGGCAG
CTACTTTCTT TCCTAAAGAT CCAAGTTAAT CTACTCTCTA AAGAGTTAGA TAAGACCTCA
AAGAGCCCTA GGGCAGCAGA GCAGTTACAA GAAATTAATG AAGGTGTTAA TACCGCCTAC
GTGCAGCTAC GAGAGTTATT ATCTACTTTC AGGCTCACCA TCAAAGACCC AAACCTAGGC
CATGCGATAG AGGCCATGAT AGAGCAGCTA CGTGGTCAGT CAGATGCCAT TATTAGCTTG
GATTACAAAT TACCTTCGCA GCTATTAGGT GCTCATCAAC ATATTCATAT TTTACAGCTC
ACTCGTGAAG CCACCTTAAA CGCAATAAAA CATGCCAACG CCAAACATAT CCATATTAGC
TGCCAGAAGG TATCGAGGGA AAAGGTGGTG TTCAGTATCA GTGATGACGG CATTGGTATC
GAGGAGTTAA AAGAAAGGGA TCAACATTTT GGTCTAGGAA TTATGCATGA ACGCGCCAGC
CGCCTCTCGG GTGTGGTAGA ATTTAGCCAG AATAAAAAAG GAGGGGCGAC TGTGACCCTT
ACCTTCCCTC CTCAACAGGA GCCAAGCGAA TAG
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| Protein sequence | MKKGRLTSAI WGFMLTLILL SSGLAIFAII NLSYSLGDAR AINASGSLRM QSYRLMFYAN
SGSEGANDKI KEFENTLHSQ ALKQSMGWYT PLDLKEKYLS VIDKWQVMRY YIESENSRLY
AAALKDFVDT IDLFVLETEQ YAALKLRFLA VSQITGLALM LLIAFFTVRL AKRKVVKPLQ
QLMQAADTIS QGNFNVEMPK TEYLELSALS SALDSTVKKL AGVYQGLEEQ VQEKTIALTR
ANNELTLLYD SLVMLHSSKL DSNSLTLALN QLQTHQSEAH LRLVMVQDGE VVDIISTDND
GDWPHNGENT QQFPLQFEDN NLGYLEVLSS KPFSFQLFNN FAIMLARSMV IYNAGEQRQQ
LALMEERGVI ARELHDSLGQ LLSFLKIQVN LLSKELDKTS KSPRAAEQLQ EINEGVNTAY
VQLRELLSTF RLTIKDPNLG HAIEAMIEQL RGQSDAIISL DYKLPSQLLG AHQHIHILQL
TREATLNAIK HANAKHIHIS CQKVSREKVV FSISDDGIGI EELKERDQHF GLGIMHERAS
RLSGVVEFSQ NKKGGATVTL TFPPQQEPSE
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