| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0824 |
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| Symbol | |
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| ID | 5661223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1023747 |
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| End bp | 1024352 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641235369 |
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| Product | membrane lipoprotein lipid attachment site |
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| Protein accession | YP_001500686 |
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| Protein GI | 157960652 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
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| TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.525373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACTTA CTATGAAACA ATTTAAAGTC ATTTTTATTC TTGCAGCAGT TATCGGTTTA
TCTGCCTGCC AATCAAAAGT TGAATACGGT GATGCCACAG AAGTGGAAAC CGTTAACGAG
AACTTCGGCT CAACCGATCT TCAAGCTATA GCCGCTAAGA TGGTCGACAG CATGCTGACC
TTCCCACCCG TTGTGGCGAT GACAGCCAAT GACCGCCCAA TTATTTTTGT CGATAAGATC
AAGAACAAAA CCTCTGAGCA TATCGATACA GAATCAGTTA CCGATTCAAT CAGCAACAAG
CTACTACGCT CAGGTAAATT CCGCTTTATC GATATGACCA AAGTGGATTC AGTTCGTAAG
CAGCTAGATT ACCAGAACAA CTCAGGCATG GTTGATCCAT CGACTGCAAT TAACTTCGGT
CGTCAAATTG GTGCCCAGTT CATGCTATAC GGCAACCTGT CTAGCATCGT TAAGCAAGAT
GGCAGCACTA AAGACGTTTA CTACAAGATG ACCATGCGTT TAATGGATCT TGAAACAGGC
CTAATCGAAT GGTCTGATGA GAAAGAGATC CGCAAGGTTA AGTCTAAGTC TTTCTTAGGC
CTATAA
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| Protein sequence | MELTMKQFKV IFILAAVIGL SACQSKVEYG DATEVETVNE NFGSTDLQAI AAKMVDSMLT
FPPVVAMTAN DRPIIFVDKI KNKTSEHIDT ESVTDSISNK LLRSGKFRFI DMTKVDSVRK
QLDYQNNSGM VDPSTAINFG RQIGAQFMLY GNLSSIVKQD GSTKDVYYKM TMRLMDLETG
LIEWSDEKEI RKVKSKSFLG L
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