Gene Spea_0816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0816 
Symbol 
ID5661215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp1013154 
End bp1013813 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content46% 
IMG OID641235361 
Productribose-5-phosphate isomerase A 
Protein accessionYP_001500678 
Protein GI157960644 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAAG ATGAAATGAA AAAAGCTGCC GGTTGGGCTG CGCTTCAGTA CGTAGAAGAA 
AACAGCATTG TTGGTGTAGG TACCGGCTCA ACGGTCAATC ACTTTATTGA TGCACTAGCG 
ACAATGAAGT TCGATATCGA AGGTGCAGTA TCAAGCTCTG AAGCGTCAAC AGAGAAAATG 
AAGGCGTTAG GTATTCCCGT TTTTGACCTA AACAGCGTCA ATGAGTTATC TGTTTATGTT 
GATGGCGCCG ACGAAATCAA CAGCCAAATG GACATGATTA AAGGTGGCGG AGCAGCGCTG 
ACTCGCGAGA AAATCGTTGC CGCAGTTGCA GATAAGTTTA TCTGTATCGT TGATAACACC 
AAGCAAGTCG ACATTTTAGG TGAGTTCCCA CTGCCAATCG AAGTGATCCC AATGGCACGT 
TCATACGTGG CGCGCCAGAT TGTTAAGCTG GGCGGAGATC CTGTTTACCG CGAAGGCTGT 
GTTACCGATA ACGGCAACAT CATTATCGAC GTGTACAACA TGAAGATCAT GAAGCCAAAA 
GAGCTAGAAC AGCAGATTGA CGGCATTGTT GGTGTAGTGA CTAACGGCCT ATTCGCTAAG 
CGCGGCGCTG ATATTTTATT AGTTGGCACA CCTGAAGGCG TGAAGACAGT TACCTTTTAA
 
Protein sequence
MTQDEMKKAA GWAALQYVEE NSIVGVGTGS TVNHFIDALA TMKFDIEGAV SSSEASTEKM 
KALGIPVFDL NSVNELSVYV DGADEINSQM DMIKGGGAAL TREKIVAAVA DKFICIVDNT 
KQVDILGEFP LPIEVIPMAR SYVARQIVKL GGDPVYREGC VTDNGNIIID VYNMKIMKPK 
ELEQQIDGIV GVVTNGLFAK RGADILLVGT PEGVKTVTF