Gene Spea_0814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0814 
Symbol 
ID5661213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp1011167 
End bp1012198 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content50% 
IMG OID641235359 
ProductAraC family transcriptional regulator 
Protein accessionYP_001500676 
Protein GI157960642 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCATT CAAATATCGA AAACGCAGCC GCAAACGGCC AAGTTAACGC CCCAGATGTA 
CGTTTTTTGC TACTGCCCTT ACCCGAATTT AGCATGCTGC CATTCGCAGG TTTTCTGGAT 
AAATTGCGCT TTTCTGCCGA CGAGGAGGAT TACAGTCAGC AGCAATATTG CAGCTGGCAG 
ATTGTCGGGT TAACGCCCTG CCACCAGCTA TCCAGCAGCG GTGTTTCAGT TGAACTAACA 
ACGACTGTGG ATGAGATTGA ATTAACCGAT TATGACTATT TAGTCGTGTT TGGCGGCCGT 
AGTGCCCGAA GCTGTCAGCA GCTACCCAAA CAGTATCAAG ATCTATTGCG CTTAGCCGCA 
GCGAAAGGAG TCACCTTAGT CAGTATTGAT AATGCCTGCT TTCTGTTTGC CGCAGCAGGT 
TTACTTGATA ACCACAGTGT GGCGGTGCAC TGGCGCCACG TACAAGAGTT TCGCACCGCC 
TTTCCACGAA TCGACATCCG CACCGAACAG CTCTATTGCA TCGATAGGAA GCGGATCAGC 
TGCGCCGGAG GCAGTGCAGC TATCGATCTC GCTGTTGAGC TATTAGCCCG CCATTGCGGC 
CGGACAAAGG CACTCAAGGG GCTGGCGGAC ATGCTTGTGG ATGAAGCGAG AGAGCAAAGG 
CACCAACTCA AATCCCTCAA TACCAATATT CAAATAAACA ACACAGCAAG TCGCCACGTT 
GGTCGAGCTA TCAGCCTGAT GCGCCAATTA CTCGCCAGCT CTGACACAGT CGATGCACTG 
GCTGATAAAT TAGCGATAAG TCGCCGCCAA CTGGATAGAC AATTTAAAGA CTGTTTTGGG 
CAGACGGCTC ATGAATACTG GAGTGAAATG CGACTACAGC ACCTGCATTG GCGAGTGGTA 
AATTCCGACC ATAGCTTGCA ATATTTGGCT GACGAAGTGG GTATTCAGGA CGTGAGCTAT 
CTGTGTAAGC TGTTTCGCAA GCGCTTCGGT TGCAGTCCTA ATTCATTACG TAAGCCCAAG 
CTTTTCACCT AA
 
Protein sequence
MSHSNIENAA ANGQVNAPDV RFLLLPLPEF SMLPFAGFLD KLRFSADEED YSQQQYCSWQ 
IVGLTPCHQL SSSGVSVELT TTVDEIELTD YDYLVVFGGR SARSCQQLPK QYQDLLRLAA 
AKGVTLVSID NACFLFAAAG LLDNHSVAVH WRHVQEFRTA FPRIDIRTEQ LYCIDRKRIS 
CAGGSAAIDL AVELLARHCG RTKALKGLAD MLVDEAREQR HQLKSLNTNI QINNTASRHV 
GRAISLMRQL LASSDTVDAL ADKLAISRRQ LDRQFKDCFG QTAHEYWSEM RLQHLHWRVV 
NSDHSLQYLA DEVGIQDVSY LCKLFRKRFG CSPNSLRKPK LFT