| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0809 |
|---|
| Symbol | |
|---|
| ID | 5661208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 1003095 |
|---|
| End bp | 1004396 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641235354 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001500671 |
|---|
| Protein GI | 157960637 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3681] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAC ACTTATGGCC TTTATTCCTT GAAGCAATTA AACGCGATGT AGTTCCTGCC
CTTGGCTGTA CCGAGCCCAT TTCTGTTGCA TTAGCTGCCG CAATTGCCAT TGGTGAGTTA
GGGATAAAAA ACCAAGCCAG TAACGTCAAA ATGGACGTCA GTGTTTCTGC TAATTTAATG
AAAAATGGCA TGGGCGTTGG TATTCCTGGC ACTGGGATGG TTGGCTTGCC TATTGCTGCT
GCAATCGGGG CGGTTGCAGG CGATAGTAAT GCGGGTCTTG AGGTGTTAAA AAATCTCACT
GATAGCGACG TTCAAGCGGC TAAATTAATG CTGGATAACG GCCAAGTGAC AGTAGGCGTC
GCTGATGTGG CTAATGTTTT ATACGCCAAA GTGACGGTTT ATTATCAGCA GCAAACGGCG
AGCGTCACCA TTGCCGATAG CCACACCAAG GTTATCGCGA TTGAAAAAAA TGGTGAACAA
TGTTTACCCG CTCCAGAGGT CGAGTCTGTT AATGACAAAA GTAACAAAGC CAATCCGTTT
ACTGAGGCAA GACTGCAAGA TATTTATGAT TTTGCCATGC ATGCACCATT GGATGACATA
GGTTTTATTA TGCAATCCAA AAGCCTAAAT GATGCCTTAT CTATTGAAGG ACTCAGTGGT
CATTATGGTT TAAAGATTGG TGCGACATTG GTTAAAAACC AAGAGAAAGG CCTATTATCT
GGTGGCTTAT TGACTGAAGT ACTCGCCCGT ACTGCAGGGG CTTCTGATGC ACGTATGGAT
GGCGCCATGA TGCCTGCGAT GAGTAATTCG GGCTCAGGCA ACCAAGGTAT CGCGGCAACC
ATGCCTGTCG TTGCTTGTGC TGAGTTTCTT AAATCCAGCG AAACACAAAC TATCCGTGCG
TTAATGTTGT CGCATTTAAC CGCTATCTAC ATTAAGAGCT ATCAAAACAA GCTCTCAGCC
TTATGCGGAG CGACAACGGC AGCTATGGGA TCAGCTGCTG GCATTACCTA TTTGCTAGAT
GGTGAAATTG AGCAGGTAAG TGCTGCAATT TGTAGCATGA TTGGTGATGT TAGTGGCGTT
ATTTGTGATG GTGCAAAAAC AGCTTGTGCA ATGAAAGTGT CTTCATCGGC AGGGGCTGCG
GTAAAATCTG CCTTGATGGC CATTGATGGC ATTCGAGTTA CCGGCACTGA AGGCATTGTT
GCTGATGATG TTGACCAAAC TATCAGTAAC CTTGCGACAT TAGCTAATGG CGCAATGACA
CAAACCGATG TGCAGATCTT AGAGATTATG ATGCACAAGT AA
|
|---|
| Protein sequence | MKQHLWPLFL EAIKRDVVPA LGCTEPISVA LAAAIAIGEL GIKNQASNVK MDVSVSANLM
KNGMGVGIPG TGMVGLPIAA AIGAVAGDSN AGLEVLKNLT DSDVQAAKLM LDNGQVTVGV
ADVANVLYAK VTVYYQQQTA SVTIADSHTK VIAIEKNGEQ CLPAPEVESV NDKSNKANPF
TEARLQDIYD FAMHAPLDDI GFIMQSKSLN DALSIEGLSG HYGLKIGATL VKNQEKGLLS
GGLLTEVLAR TAGASDARMD GAMMPAMSNS GSGNQGIAAT MPVVACAEFL KSSETQTIRA
LMLSHLTAIY IKSYQNKLSA LCGATTAAMG SAAGITYLLD GEIEQVSAAI CSMIGDVSGV
ICDGAKTACA MKVSSSAGAA VKSALMAIDG IRVTGTEGIV ADDVDQTISN LATLANGAMT
QTDVQILEIM MHK
|
|---|
| |