Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0807 |
Symbol | |
ID | 5661206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1000125 |
End bp | 1001849 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641235352 |
Product | single-stranded-DNA-specific exonuclease RecJ |
Protein accession | YP_001500669 |
Protein GI | 157960635 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCCATA AGATAGTTCG CCGCCCAAGA GTCGATGATA GCCACCTGCC CGATACATTT TCGCCGATTT TAAAACAGAT CTATGCCAGC CGTGGAGTCA GTGCGTCTGA CTGCGAGCTG AGTCTAGCTA AGTTACTCAG GCCCAATACT ATGGCAGGGC TTGAGCAGGC TGCCAAGATA GTTGCTGATG CCATTGAGGC ACAAGAAGCA ATTCTTATTA TGGGTGACTT CGATGCCGAT GGCGCGACCT CGACCAGCGT CTGTGTGTTG GCGCTGCGGA TGATGGGCGC ACAGAAGGTG GATTACCTTA TTCCGAACCG CTTCGATTAC GGTTATGGAT TAAGCTCTGA GATTGTTGCG GTTGCGGCGA GTAAAAATGC CGAGCTGTTG ATCACCGTCG ACAACGGAAT TTCATCCATT GAAGGCGTTG CCGCGGCAAA GGCCTGTGGC ATGACGGTGG TGATCACCGA CCACCATCTA CCGGGTCATA CCTTGCCGGA CGCCGATGCT ATCGTTAACC CAAATCAAGA TGGCTGCGGC TTTGCTAGTA AGTCGATTGC CGGTGTGGGC GTAGCCTTCT ATCTGATGTC AGCGCTTAGA GCCGAGCTTC GAAGCCGCAA CTGGTATCAA CTGCAAAACA TAGCCGAGCC TAATCTTGCT CAACTACTGG ATATTGTTGC CCTAGGCACA GTTGCCGATG TGGTGTCGCT AGACACCAAT AACCGTATCT TAGTGGAAGC GGGTTTACAG CGAGTTAAAG CGGGACGTTG CCGTGTTGGT ATTACCGCCC TATTGGAAAT CGCTAAACGT ACACCGTCAC GCATCGTTGC TTCAGACTTT GGTTTTGCAG TGGGCCCAAG GCTTAACGCC GCAGGTCGTC TCGATGAGAT GGCGTTAGGG GTGGAAACCT TATTGTGTGA CGATATCATG CTAGCAAGGC GCATGGCATC AGAGCTCGAT GGTCTAAACG CTGAGCGACG CGACCTTGAA GCCGATATGC AGCAAGAAGC GCTCAAGAGT CTTGAGAGTA TCGAGCTCAA CGAAGCCGAA TTGCCGTGGG GAATTGCAAT TTTCCAAGCC GACTGGCATC AAGGTGTGAT TGGGATCTTG GCTTCGCGGA TTAAAGACAA GTATCACCGT CCTGTAATCG CCTTTGCCGA AGCGGGTGAG GGCGAAATTA AAGGTTCGGC GCGCTCGATT AAAGGTTTGC ATATGCGTGA CCTATTAGAG CTTATCAACA CCCGACACCC TGGGCTTATT TTAAAATTTG GTGGCCACGC TATGGCGGCG GGGTTATCTA TTCAAGCGGG GCAATTTGCC CAGTTTGCCG ATGCCTACGA TAAAGCCGTA CGTGAAGTGC TAGCGCCTGA ATTACTGACG GGCGAGCTAG TCTCTGATGG TGAGTTGGTA CCCGAGCAGT TCAAGCTTGA GCTTGCCAGT GAGCTTAGAG CCGCAGGCCC ATGGGGCCAG TCATTCACTG AACCCTTATT TGATGGTTAC TTTAGGGTGA TTCAGCAGCG CATCGTTGGT GAAAAGCACT TAAAATTGAT TCTGGAAACG GAGTGCGGCC GAGTGATGCT CGATGCCATC GCTTTTAATG TGGATTTGAA GACCTGGCCC GATGCCACGA TTCAGTATGC ACAGGTGGTG TATAAACTCG ATGTGAATGA GTTTAGAGGC AACGAGAGCT TGCAGCTGAT GGTTGAGCAG ATTGAGCCTA AATAA
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Protein sequence | MIHKIVRRPR VDDSHLPDTF SPILKQIYAS RGVSASDCEL SLAKLLRPNT MAGLEQAAKI VADAIEAQEA ILIMGDFDAD GATSTSVCVL ALRMMGAQKV DYLIPNRFDY GYGLSSEIVA VAASKNAELL ITVDNGISSI EGVAAAKACG MTVVITDHHL PGHTLPDADA IVNPNQDGCG FASKSIAGVG VAFYLMSALR AELRSRNWYQ LQNIAEPNLA QLLDIVALGT VADVVSLDTN NRILVEAGLQ RVKAGRCRVG ITALLEIAKR TPSRIVASDF GFAVGPRLNA AGRLDEMALG VETLLCDDIM LARRMASELD GLNAERRDLE ADMQQEALKS LESIELNEAE LPWGIAIFQA DWHQGVIGIL ASRIKDKYHR PVIAFAEAGE GEIKGSARSI KGLHMRDLLE LINTRHPGLI LKFGGHAMAA GLSIQAGQFA QFADAYDKAV REVLAPELLT GELVSDGELV PEQFKLELAS ELRAAGPWGQ SFTEPLFDGY FRVIQQRIVG EKHLKLILET ECGRVMLDAI AFNVDLKTWP DATIQYAQVV YKLDVNEFRG NESLQLMVEQ IEPK
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