| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0802 |
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| Symbol | |
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| ID | 5661201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 993624 |
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| End bp | 994859 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235347 |
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| Product | ATP-dependent RNA helicase SrmB |
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| Protein accession | YP_001500664 |
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| Protein GI | 157960630 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGCA TGCAATTTGA AGATCTCCAG CTTGACCCTT GTTTGTTAGA GTCACTAAAA
GCAATGGGCC ACAACAAGCC CACTACGATA CAACAACAAA CAATACCGGT TGCCATGGAG
CAAAGAGATA TTTTAGCTCG TGCCCCTACG GGTACAGGTA AAACGGCAAG TTTTCTTCTA
CCTGCGTTGC AACACCTTAT CGATTTTCCA CGTCGATATG GCGGCCGTGC ACGAGTATTG
ATTCTTACTC CTACTCGTGA GCTTGCCAGC CAAATCCATC GTTATGCTAG CCACCTTGCT
ACTGGTCTAG GCTTAGACAC AGTTATCATC ACTGGCGGTG TGCCTTACGG TCCTCAGGAA
GAAGCGCTAC AGAAGAACGT TGATATCTTA GTTGCCACTC CAGGCCGTTT AATGGAGTAC
CTAGACAAGG GTCACTTCAA CGCAGAAGAA GTAGAAGTAC TGATCATCGA TGAAGCCGAC
CGCATGCTGG ATATGGGCTT CTCGGCTGTT GTTGAAAGCA TTGCAATCGA GTCTGTTGGT
CGTAAGCAAA CTATGCTGTT CTCAGCCACG CTTGAAGGCA GTGACGTTGG CCGTTTCTCG
CACAACCTAC TGACCAATCC GGTTAAGCTT GAAGCAGAAG CACCACGTAG CGAAAAAGCC
AAGATCCACC AGTGGATCCA CCTAGCCGAC GACAAAGCGC ATAAGTTTGC CCTGTTGTGC
GCTCTATTAA AACAAGAGGA AGTGCAACGC ACTATCGTCT TCGTTAAGAC ACGTGAATCG
GTAGCTAGCC TAGAAGGCTT GCTACAAAAA GAAGGCATCA CTTGTGCATT TATGCGCGGT
GACATGGAGC AAAAAGCGCG CTTCCAGGCA TTAGGTCGTT TCACCAAAGG TGAAGTGAAT
ATCTTGCTAG CAACTGACGT TGCCGCACGT GGTATCGATA TTGACGATAT TACCCATGTT
ATCAACTTCG ATATGCCACG CTCAGCAGAT ACTTATGTAC ACCGTATCGG TCGTACAGGC
CGCGCTGGCG CTAAAGGTAC AGCTATATCA CTAGTTGAAG CCCATGACAT CCGTGTTGTT
GGTAAAATCG AGCGTTATAT CGAGCAACCA TTAAAGCGTC GCTTCGTTAA AGATCTGCGT
CCAAAGAACA AAGAAGCTAA GCCGCCTGGA AAGAAAAAGC CGGGGCCAGA AGGTAAGAAT
TTTAGCAAGA AGAACAAAAA GAAAAAGAAG AAGTAA
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| Protein sequence | MPRMQFEDLQ LDPCLLESLK AMGHNKPTTI QQQTIPVAME QRDILARAPT GTGKTASFLL
PALQHLIDFP RRYGGRARVL ILTPTRELAS QIHRYASHLA TGLGLDTVII TGGVPYGPQE
EALQKNVDIL VATPGRLMEY LDKGHFNAEE VEVLIIDEAD RMLDMGFSAV VESIAIESVG
RKQTMLFSAT LEGSDVGRFS HNLLTNPVKL EAEAPRSEKA KIHQWIHLAD DKAHKFALLC
ALLKQEEVQR TIVFVKTRES VASLEGLLQK EGITCAFMRG DMEQKARFQA LGRFTKGEVN
ILLATDVAAR GIDIDDITHV INFDMPRSAD TYVHRIGRTG RAGAKGTAIS LVEAHDIRVV
GKIERYIEQP LKRRFVKDLR PKNKEAKPPG KKKPGPEGKN FSKKNKKKKK K
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