Gene Spea_0800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0800 
Symbol 
ID5661199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp989039 
End bp992185 
Gene Length3147 bp 
Protein Length1048 aa 
Translation table11 
GC content49% 
IMG OID641235345 
Productacriflavin resistance protein 
Protein accessionYP_001500662 
Protein GI157960628 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACC AAAACGACAC CCAAAAAGGG CTTATCGCTT GGTTTGCTAA GAACAATGTA 
GCTGCCAACC TACTGATGTG GATCTTAATC ATAGGCGGCC TATTTAGTAC TCTCATCATT
AATAAAGAGA TTTTCCCCTC CTTTGAGCTT AACTATCTAC AGATCTCTGT TGCCTACCCA
GGCGCCGCCC CTCAAGAAAT TGAGGAGGGG ATCAATATTA AAATTGAAGA AGCGATTCAA
GATATTAACG GCATCAAGAA GGTCTCTTCG GTTGCCAGTG AAGGGGTCGG GGCTGTCACT
ATCGAGGTAG AAGACAGCTA CGATCCGCAA GATATTCTCG ATGAAGCCAA ACTGCGCATC
GATGCCATCT CCACCTTTCC GGTGAATATT GAGAAACCCA ATATTTTTCG TATTAAGCCA
GAAAACAATG TGATCTGGAT TTCAGTCTAT GGCGATCAGT CGCTGCAAGA GATGAAAGAG
TTGGCGAAAA CTGTACGTGA CGAGGTGGCC TTACTGCCCG CAGTCACCAG AGCTCAAGTC
ACTGGTGTAC GAGAATATGA GATAGGCATT GAACTGTCGG AAGATAAACT CAGAGAGTAT
GGCCTGACTT TCTCACAGGT GGCACAGGCG GTACAAAACT CTTCAATCGA TCTACCTGGT
GGCTCGATTC GCGCTAAAGA TGGCGACATC TTACTGCGCA CCAAAGGCCA AGCTTACACA
GGCGAAGATT TCTCGCAAAT CGTAGTGAGC ACTCGCCCAG ACGGTAGCCG AGTCATGCTG
CCGCAAGTGG CCACCATTAA CGATAGTTTC GAAGAGCGAT TAGAGTACAC CCGCTTTAAC
GGTCAACCCG CCGCGATCAT CGAAGTACTC AGTGTCGATG ATCAAAACGC GCTGGATATC
TCCGAGCAAG TTAAAGGTTA TATCGAACAG AAACGTGATG CATTGCCTGC TGGCGCTAAA
CTGGATACTT GGGGTGACCT CACCCACTAT CTCAAAGGCC GCTTAAACAT GATGCTTTCC
AACATGTTTT ATGGTGCGCT GCTAGTGTTT ATTATCCTAG CGCTATTTTT AGAGATAAAG
CTCGCCTTCT GGGTGATGAT GGGGCTGCCG GTGTGTTTCC TCGGCGCCAT GCTGTTTATG
CCGCTAGAAC CCTTCTCGCT ATCGATTAAT ATGTTAACCC TGTTTGCCTT CATTCTGGTG
TTAGGGATAG TGGTGGATGA CGCCATTGTC ATCGGCGAAA GTGCCTACAC AGAGATTGAG
GAGAATGGCC ACTCCCTAGA GAACGTGGTC AAAGGAGCCA AGAAAGTGGC TATGCCCGCG
ACCTTCGGGG TACTAACCAC CATAGCAGCC TTTATGCCTA TGTTAATGGT CTCCGGGCCT
CAAGGCATTA TCTGGAAATC CATCGGCATG ATAGTGATCT TATGTCTGCT GTTTTCCTTG
GTGGAATCAA AACTGATTTT ACCGGCTCAC CTCGCCCATA TGAAACCACG TAAGCCCAGA
GAGCAGCTTG GATTACTAGG CCGATTTAAA GCCGGCTTAA ATGACAAGGT ACAATACTTT
ATTCATAATC AATACCGTCC ATTCTTAGAG CGTTGTATCG TGCAGCGCTA CAATACGGTA
GCGGTTTTTG TTGGGGTGCT CATACTCTCT ATCGCGCTGG TGATCAGTGG TCAGGTTCGC
TGGGTGTTCT TCCCCGATAT CCCATCTGAC TTCATCCAAG TTCATATCGA TATGGATGAG
GGTAGCTCTG AAGAAAATAC CCTTAAAGTT GTGCAGGAAG TTGAAGAAGC CCTGTATGCC
ATGAACGATG AGATGGAACA AGAGGTTGGC TACCCGGTGG TTAAGCACAG CTTTATCAAT
ATGAGCTCGC GCACCTCTGC CTTCCTATTC GCCGAACTAA CTAAAGGTGA AGATCGCGAT
GTCGATGGTG AGGCCATTGC GAGCGCTTGG CGCAAGCAAT TGCCAGAGCT CGTCGCGGTG
AAGAAGTTAA GTATCAATGC CAGCACCAAC GACGCCGGCG GTGATATCTC CTTTAGACTG
ACATCGAGTA ACCTAGATCA ACTATCGAAA GCCTCTGAAG AACTCAAGCA GAAGCTTCGT
AGCTATGAAG GCGTGTATGA TATTTCTGAT AACTTCTCCT CTGGCAGCCA AGAGATCAAG
CTAAAGATCC GTCCAGAAGC CGAAGCATTA GGGCTGACGC TGTCTGACCT TGCTCGCCAA
GTGCGTTATG GCTTCTACGG TTATGAAGCC CAGCGTATTT TGCGTAATAA AGAGGAAGTA
AAGGTGATGG TGCGTTATCC GCTTGAGCAG CGTCGCACCG TTGGCCATCT CGAGAATATG
CTTATTCGCA CTCCTAGCGG TGCGTCGGTT CCCTTCTCAA CGGTAGCGGA ACTGCAGCTG
GGTGACTCCT ACTCTTCGAT AACTCGTGTC GATGGTCGCC GTGCAATTAG CATTATCGCC
AACGCCGATA CCAATAAGGT TGAGCCATCT AAAGTCGTCA GCGAAATCCA AAAGGACTTC
CTACCCGCGT TGCAGGCTAA GTACCCTAAT ATCTCAACCG CACTCGATGG CGGCAGTGCC
GATGAGCAAA GCGCCCTGAT TAGCCTGCTA CAAGGTTTCT TCTTCGCGCT GTTCACCATC
TATGCCCTGA TGGCAATCCC GCTGAAATCT TATAGTCAGC CACTGATCAT CATGTCGGTG
ATCCCATTCG GTATGATTGG CGCCCTATTC GGCCACTTCA TCCTCGGACT GAATATGAGT
ATCTTGAGCC TCTGTGGCAT AGTGGCACTA GCCGGTGTAG TGGTGAACGA CTCGCTTATC
TTGGTCGACT TTGTTAACCG TGCACGCGCC GAAGGTCATA GCATCATCAA GGCCGCGGTC
AATTCAGGCT GCTATCGTTT CAGGGCGATT ATACTGACTT CACTGACCAC CTTTGTGGGC
TTAGTGCCCA TCTTGCTAGA ACGAAGCCTA CAGGCACAGA TTGTGATCCC TATGGCAGCA
TCATTGGCAT TCGGTATTTT GTTCTCGACT GTGGTCACCT TAATCTTGGT ACCTATTCTT
TACATCATAT TGGACGATGT GAAGCGAGGC TTTAGCCGCT TCTTCCACTG GTGGTGGCAA
CCTAAGTCTG ATCAAGCTTC GATATAG
 
Protein sequence
MSDQNDTQKG LIAWFAKNNV AANLLMWILI IGGLFSTLII NKEIFPSFEL NYLQISVAYP 
GAAPQEIEEG INIKIEEAIQ DINGIKKVSS VASEGVGAVT IEVEDSYDPQ DILDEAKLRI
DAISTFPVNI EKPNIFRIKP ENNVIWISVY GDQSLQEMKE LAKTVRDEVA LLPAVTRAQV
TGVREYEIGI ELSEDKLREY GLTFSQVAQA VQNSSIDLPG GSIRAKDGDI LLRTKGQAYT
GEDFSQIVVS TRPDGSRVML PQVATINDSF EERLEYTRFN GQPAAIIEVL SVDDQNALDI
SEQVKGYIEQ KRDALPAGAK LDTWGDLTHY LKGRLNMMLS NMFYGALLVF IILALFLEIK
LAFWVMMGLP VCFLGAMLFM PLEPFSLSIN MLTLFAFILV LGIVVDDAIV IGESAYTEIE
ENGHSLENVV KGAKKVAMPA TFGVLTTIAA FMPMLMVSGP QGIIWKSIGM IVILCLLFSL
VESKLILPAH LAHMKPRKPR EQLGLLGRFK AGLNDKVQYF IHNQYRPFLE RCIVQRYNTV
AVFVGVLILS IALVISGQVR WVFFPDIPSD FIQVHIDMDE GSSEENTLKV VQEVEEALYA
MNDEMEQEVG YPVVKHSFIN MSSRTSAFLF AELTKGEDRD VDGEAIASAW RKQLPELVAV
KKLSINASTN DAGGDISFRL TSSNLDQLSK ASEELKQKLR SYEGVYDISD NFSSGSQEIK
LKIRPEAEAL GLTLSDLARQ VRYGFYGYEA QRILRNKEEV KVMVRYPLEQ RRTVGHLENM
LIRTPSGASV PFSTVAELQL GDSYSSITRV DGRRAISIIA NADTNKVEPS KVVSEIQKDF
LPALQAKYPN ISTALDGGSA DEQSALISLL QGFFFALFTI YALMAIPLKS YSQPLIIMSV
IPFGMIGALF GHFILGLNMS ILSLCGIVAL AGVVVNDSLI LVDFVNRARA EGHSIIKAAV
NSGCYRFRAI ILTSLTTFVG LVPILLERSL QAQIVIPMAA SLAFGILFST VVTLILVPIL
YIILDDVKRG FSRFFHWWWQ PKSDQASI