| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0792 |
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| Symbol | |
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| ID | 5661191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 980408 |
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| End bp | 981148 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641235337 |
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| Product | hypothetical protein |
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| Protein accession | YP_001500654 |
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| Protein GI | 157960620 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3137] Putative salt-induced outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.954407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA TGCTTACGGC TATGGCTGTG GTAATGGCGG CTCCTTTTGC TGCGCAAGCA
GGGGCTGACT TTGTTGAAGG CGATAAGACC TTTGCTGGTG AAGCCGAGCT CGGTGCGACA
TTAACCACAG GTAACACTGA AACCTCGTCG GTGAAAGGTC GTCTAAACAT GTTGCAAGAG
CTAGGTAATT GGGAAAACCA GTACCTGTTT GAAGGCTTGT ATAAAGAAGA CACTGGAGAG
GTTACTGCTA AGCGTTACTA CGGCGGTATT CAAGGTGATT ACAAGTTCGA TGACAAGAAC
TACATGTATA TCACCGGCAA CTATGAAGTC GATCCATTTA CTGGTTATGA CTATAAGGCC
GTTGCTTCAG CCGGTTATGG TCACAAGTTT ATTGACAGCG GTAACATGTT CCTAAGTGCT
GAGATTGGTC CTGGTTATAT CTACAAGAAG TTAGATGATG AGCAGACTGC AATACTCGGT
TATGATAACG AAGATAGCGT TGTCGCTCAC GGCGCGATGA ACTTCACCTA TGAGTTCAGT
GAAACTTCCA AGTTTACTCA ACTGTTTGTT GCTGACTATG GTGATAGCTT AGAAGGTCGT
TCTGAGTCGG CAATTACGGC TAATATCGTC GGCGCACTCG CCATGAAATT TGCAGTTATT
GTTCGTTACA ATGACAGCCC ATTAGATGAC AAAGAGAGCA CAGATACAGA GACAAACATG
ACTCTGTTAT ACGCCTTCTA A
|
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| Protein sequence | MKKMLTAMAV VMAAPFAAQA GADFVEGDKT FAGEAELGAT LTTGNTETSS VKGRLNMLQE
LGNWENQYLF EGLYKEDTGE VTAKRYYGGI QGDYKFDDKN YMYITGNYEV DPFTGYDYKA
VASAGYGHKF IDSGNMFLSA EIGPGYIYKK LDDEQTAILG YDNEDSVVAH GAMNFTYEFS
ETSKFTQLFV ADYGDSLEGR SESAITANIV GALAMKFAVI VRYNDSPLDD KESTDTETNM
TLLYAF
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