Gene Spea_0790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0790 
Symbolpgk 
ID5661189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp977642 
End bp978817 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content50% 
IMG OID641235335 
Productphosphoglycerate kinase 
Protein accessionYP_001500652 
Protein GI157960618 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.250302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATTC TTAATATGAA AGATTTAGAC CTTCAAGGTA AGCGTGTGCT TATTCGTGAA 
GATCTTAACG TACCAGTCAG CGATGGTGTG GTAACCAGTG ACGCGCGTCT GCGTGCTTCT
CTACCAACGA TTAAGCTTGC GCTTGAAAAA GGTGCGGCGG TTATGGTGAT GTCTCACCTA
GGCCGTCCAA CTGAAGGCGA GTTCAATGCT GAGTTCTCTA TGCAGCCTGT AGTTGATTAC
CTAACAAAGG CGCTAGATTG CCCTGTACGC CTAGCAGCAG ACTACCTAGA CGGCATCGAA
GTGGCTGTCG GTGAAGTGGT AGTGTTTGAA AACGTGCGTT TTAACTTGGG TGAGAAGAAG
AACGACGAAG CGCTGGCTAA GAAGATGGCG GCACTTTGTG ACGTATACGT GATGGATGCA
TTCGGCACGG CTCACCGCGC ACAAGCATCG ACTCACGGTG TTGGTCTGCA CGCGCCTATC
GCTTGTGCGG GTCCATTGTT AGCGGGTGAG TTAGAAGCCT TAGGTAAGGC TCTTGATAAC
CCAGCACGCC CAATGGTAGC CATTGTTGGT GGTTCTAAAG TTTCAACAAA ACTGACAGTG
CTTGAAAGCC TTTCAACTAA AGTTGACCAA CTTGTAGTGG GTGGCGGCAT CGCCAACACT
TTCGTTGCTG CAGCAGGCCA CAAGGTGGGT AAGTCGCTTT ATGAGGCCGA CCTGATTGAA
GAAGCTCAAC GCCTTGTTGC TAATGCGCAG AGCCGTGGTG GTGACATTCC AGTACCTACT
GATGTGGTTG TTGCAGGCGA GTTCAGCCCT ACCGCAACTG CAACGCTGAA AGATGTAAGC
GATGTATCTG ACACAGATAT GATTTTCGAT ATCGGCCCAG ATAGCGCCGA AGCTTTAGCC
GAGATCATCA AAAATGCTGG CACGGTTGTA TGGAACGGTC CAGTCGGTGT ATTTGAGTTT
GATCAGTTCG GTGAAGGGAC TAAGCGTATT GCTCAAGCAA TTGCCGAGTC AAATGCCTTC
TCTATCGCTG GCGGTGGTGA CACATTAGCG GCTGTCGATA AGTATGGTAT CGCCGACAAG
GTGTCTTATA TCTCAACGGG TGGCGGCGCT TTCCTAGAGT TTTTAGAAGG AAAAGAGTTG
CCAGCAGTTG CCATGCTTGA GAGCCGCGGC CAGTAA
 
Protein sequence
MTILNMKDLD LQGKRVLIRE DLNVPVSDGV VTSDARLRAS LPTIKLALEK GAAVMVMSHL 
GRPTEGEFNA EFSMQPVVDY LTKALDCPVR LAADYLDGIE VAVGEVVVFE NVRFNLGEKK
NDEALAKKMA ALCDVYVMDA FGTAHRAQAS THGVGLHAPI ACAGPLLAGE LEALGKALDN
PARPMVAIVG GSKVSTKLTV LESLSTKVDQ LVVGGGIANT FVAAAGHKVG KSLYEADLIE
EAQRLVANAQ SRGGDIPVPT DVVVAGEFSP TATATLKDVS DVSDTDMIFD IGPDSAEALA
EIIKNAGTVV WNGPVGVFEF DQFGEGTKRI AQAIAESNAF SIAGGGDTLA AVDKYGIADK
VSYISTGGGA FLEFLEGKEL PAVAMLESRG Q