Gene Spea_0789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0789 
Symbol 
ID5661188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp976253 
End bp977272 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content47% 
IMG OID641235334 
Producterythrose 4-phosphate dehydrogenase 
Protein accessionYP_001500651 
Protein GI157960617 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01532] D-erythrose-4-phosphate dehydrogenase
[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.184491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGAG TCGCTATTAA TGGCTACGGC CGCATTGGTC GTTCAATTCT TCGTGCACTG 
TATGAGTCTG CAAAACGCGA CCGTATTCAA ATTGTGGCGA TTAACGAGTT GGCAAAACCA 
GAAGCCATGC TTCATTTGAC TCAGTACGAC ACCACTCACG GCCGCTTCCA CACCCAAGTT 
AAGCTCGATA ATCAGCATAT GATTATTGGC GACGATGCCA TTAAGCTGCT GCATGAACCC 
GATCCTGCTA AATTGCCCTG GAAAGAGATG GATATCGATA TCGTTTTCGA AGCCACGGGT 
GTAATTAACG ACAGGCTGGA ATGTGAGGCG CACATTCAAG CTGGCGCCAA ACAAGTATTA 
ATCAGTCATC CATCATCAAG TGATGTCGAT GCCACCATAG TTTTTGGTGT GAACCAAGAT 
TTACTTAAGG CCGAACATAC GGTTGTGTCT AATGCCTCTT GCACAACAAA CTGTATCGTA 
CCGGTTATCG ATGTGCTCGA CAGGCACTTC GAAGTTAAAA GTGGTGCCAT TACCACTATC 
CATTCGGCGA TGAACGATCA GCAGGTGATC GATGCCTATC ATGACGATCT GCGAAGAACC 
CGCGCCGCTG GGCAATCAAT TATTCCAGTA GATACTAAAC TTGCTCGTGG TATTGAGCGC 
ATCTTGCCGC ATATGAAAGA CAAGTTTGAA GCTATCTCTG TTCGAGTTCC GACCATCAAT 
GTTACCGCTA TCGACCTTTC CGTTACGCTA AATAAGCGCG TCGATATCGA GACCGTTAAT 
CAGGTACTAA AACAAGCCAC TGAAGGTTCT TTCTCAGGCG TGGTCGGCTT TACCAATGAG 
CCGTTAGTCT CTTGTGATTT TAACCACGAC CCGCGCTCAA GCATTGTCGA TGGCACCCAG 
ACTCGCGTCA GCGATGGCCA CTTGGTCAAG TTACTGCTCT GGTGTGATAA CGAGTGGGGC 
TTTGCTAACC GCATGCTAGA TACCAGTTTA GAGATGATAA AGGCTAAAAG CAGGACCTAG
 
Protein sequence
MIRVAINGYG RIGRSILRAL YESAKRDRIQ IVAINELAKP EAMLHLTQYD TTHGRFHTQV 
KLDNQHMIIG DDAIKLLHEP DPAKLPWKEM DIDIVFEATG VINDRLECEA HIQAGAKQVL 
ISHPSSSDVD ATIVFGVNQD LLKAEHTVVS NASCTTNCIV PVIDVLDRHF EVKSGAITTI 
HSAMNDQQVI DAYHDDLRRT RAAGQSIIPV DTKLARGIER ILPHMKDKFE AISVRVPTIN 
VTAIDLSVTL NKRVDIETVN QVLKQATEGS FSGVVGFTNE PLVSCDFNHD PRSSIVDGTQ 
TRVSDGHLVK LLLWCDNEWG FANRMLDTSL EMIKAKSRT