Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0748 |
Symbol | |
ID | 5661147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 925608 |
End bp | 926735 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641235293 |
Product | diguanylate cyclase |
Protein accession | YP_001500610 |
Protein GI | 157960576 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCCAG TTCTGAAGTC ACATCAATAC AAAGCGCAAT TGAAGCGTGA AACCTTCATC ATTATCAAGC GTGGCACTAT CTGGGCGACA TATATTAGTT GCGTTCTAGC ATTTGTAGTA TTAATCAGTA GATATAACTT TATTGGCGAT AACGTCGAAT TTATCGAGCT GCACTCCAAG TTTGCGCCAC TTATGACCGT TATCATAAGT GGTCTTGCGT GGTTAAAGTA TCGAACTTTG TTTTTGGTCA CGATGAGTCA AACTTATTTC TACCTCGTGT TGCTCATTAT GTCATGGTGT TATGTGCTTA TAAGCTTCGC TTTGAAAGTA GGGCATAGCA TGCCGGGTTT AGGCTCTCTA TCGCACGTGT TGGTTTTTGT ATTTTCGCTA GCACTCTTTC CGAATCGAAA TGTGATGATA TTAGGGATCT TACCATTCCT AGTCTTTAGC GTTGTTTATC ATTCTTTTCA TTATCCCAGT GCATTGATTT ATTCCATCCC TAAAATTTTA TGTTTCTTAG GCATTCTTAT ATCAGGCCAG AAAATTATCT CAGGCTGGTT CTTTAAGGCG GTCACACGCA GCATCGAAAA CAAGAAGCTG TTACAGCAGT TTAAACGTTT GGCTTTAATT GATGGCTTGA CCAATATTAG TAATCGTCGT CACTTTGATG ATGTATTAAC TCAAGAGATA AAAGCATCAC TTCGAACTCT GCAACCGTTA TCTATCATCA TGGTTGATGT GGATTTCTTT AAACCGCTTA ACGATAGCCT TGGTCATCAA GTAGGTGATA AGCATTTAAC AAAAATTGCA GCAGTATTGA ATAGTGCACT AGAGCGACCA AGGGATCTGG TGGCTCGTTA CGGCGGAGAA GAGTTTGTTA TCGCGCTGCC TGATACCGAT TTAAGCGGTG CTATTCGAGT CGCCGAAAAG ATTAAACTGG CAATATCGGA TGCTGAACTG CACCACCCAA GCTCGAAAGT TTCAGGCTAT GTTACCGTCT CTCAAGGCGT GGCGCAGTGG CAAGAGGGAA TGGTTCCTGC TCAGCTGCTA GAGATGACTG ATAAGCTGTT ATATCAAGCC AAGTCTAGCG GCAGAGATCG TTATTGCTCT GAGCATCAAG CTCTTTAA
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Protein sequence | MDPVLKSHQY KAQLKRETFI IIKRGTIWAT YISCVLAFVV LISRYNFIGD NVEFIELHSK FAPLMTVIIS GLAWLKYRTL FLVTMSQTYF YLVLLIMSWC YVLISFALKV GHSMPGLGSL SHVLVFVFSL ALFPNRNVMI LGILPFLVFS VVYHSFHYPS ALIYSIPKIL CFLGILISGQ KIISGWFFKA VTRSIENKKL LQQFKRLALI DGLTNISNRR HFDDVLTQEI KASLRTLQPL SIIMVDVDFF KPLNDSLGHQ VGDKHLTKIA AVLNSALERP RDLVARYGGE EFVIALPDTD LSGAIRVAEK IKLAISDAEL HHPSSKVSGY VTVSQGVAQW QEGMVPAQLL EMTDKLLYQA KSSGRDRYCS EHQAL
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