Gene Spea_0742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0742 
Symbol 
ID5661141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp919122 
End bp920111 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content47% 
IMG OID641235287 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001500604 
Protein GI157960570 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.624036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG GCTTCTTTAG CGCTAAACAT TACGACATGC AGTATTTCGA TCGAACTAAT 
GCCGCTTTCA GCGCCAAGAT TGAGTACTTC GATTATCGCC TTTGCATGCA AACGGTTAAG 
TTAGCTGAAG GCTTTGAGAT CGTGTGCGCC TTCGTCAATG ATTCACTGTG TGAAGAGGTG 
TTGGTGGAGC TAGCACAAGG TGGAACCAAG ATTATTGCCA TGCGTTGTGC TGGTTTTAAC 
AATGTTGACT TAGAAGCTGC CGAGCGCCTA GGCATGAAGG TAGTCAATGT GCCTGCCTAT 
TCTCCTGAGT CAGTTGCCGA GCATACGGTA GCACTCATGC TGACCCTAAA CCGTAAAATT 
CATAAAGCCT ATCAGCGCAC GCGAGATGCG AACTTTTCTT TAGATGGCTT AGTCGGCTTT 
AACATGCATG GCCGCACCGT TGGCGTGATA GGCACGGGTA AGATTGGTCT AGCAACCATC 
AAGGTGCTAC AAGGCTTTGG TTGCAAGGTT GTGGCTCACG ATCCCTACCC GAATCAAGCG 
GTTATTGATT TAGGTGTCGA GTACTTGTCA CTTGGGCAGC TTTATCCCCT CTGTGATGTG 
ATTAGCCTGC ATTGCCCATT AACTCAAGAT AATCACCATC TGCTCAGTGA AAACAGTTTT 
AGTCAAATGA AACCCGGTGT CATGGTAATC AACACTAGCC GTGGTGGTCT GCTTAACGCC 
CTCGATGCGA TGGAAGCGCT TAAATCTGGT CAGTTAGGCT CACTGGGCTT AGATGTTTAC 
GAGAATGAGA AAGAGCTTTT CTTTGAAGAT AAGTCGAGCG AGATCATTCA AGATGATGTG 
TTTAGACGCC TGTCGGCGTG CCATAACGTG ATCTTTACTG GCCATCAGGC ATTCTTAACC 
GAAGAGGCTT TGAGCGCGAT TGCCCATACG ACACTGACAA ATGTCACCCA GCTTTTAGCC 
GGAGAGCATT GTCCTAACGA GCTGTATTAG
 
Protein sequence
MKIGFFSAKH YDMQYFDRTN AAFSAKIEYF DYRLCMQTVK LAEGFEIVCA FVNDSLCEEV 
LVELAQGGTK IIAMRCAGFN NVDLEAAERL GMKVVNVPAY SPESVAEHTV ALMLTLNRKI 
HKAYQRTRDA NFSLDGLVGF NMHGRTVGVI GTGKIGLATI KVLQGFGCKV VAHDPYPNQA 
VIDLGVEYLS LGQLYPLCDV ISLHCPLTQD NHHLLSENSF SQMKPGVMVI NTSRGGLLNA 
LDAMEALKSG QLGSLGLDVY ENEKELFFED KSSEIIQDDV FRRLSACHNV IFTGHQAFLT 
EEALSAIAHT TLTNVTQLLA GEHCPNELY