| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0738 |
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| Symbol | |
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| ID | 5661137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 916411 |
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| End bp | 917088 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641235283 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001500600 |
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| Protein GI | 157960566 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0390511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATT TCGTCTACTC TCCTCCGACA ACCCCTTGGC TTGAAGTGTT ACATCAAGAC
AAAGACATTA TGGTCGTTAA TAAACCATCG GGTCTGTTAT CTGTTCCGGG AAGAGATCCT
GCCCACGCCG ACAGTACTTA CACTCGAGTA TTGGCTGAAT TTCCACATGC TAAAATCGTT
CACCGATTAG ATATGGCGAC TTCAGGCGTC ATCGTTGTGG CGTTACTGCG TAGCGCAGAG
TCGGAGCTTA AGCGTCAGTT CAGAGATAGA GAAACCCAGA AGACCTACTA TGCTAGGGTC
GCGGGCCATG TCAAACAGAG CCACGGCACC ATTAACCTAC CGTTAATTTG TGACTGGCCA
AATCGCCCAA AGCAGAAGGT GGATCATAAG ATAGGTAAGC CTTCACAGAC TCATTATGAA
GTGATTAGCT ATGGCAAGCG CTCAACCTTA GTAAAGCTAA CGCCGATCAC AGGCCGCTCT
CATCAGCTGC GCGTACATAT GATGGCACTA GGCCACCCAA TTTTGGGTGA TAACTTCTAC
GCAGATCCTC TGGCCAAGCG ACTCGCTCCG CGACTACTGC TGCACGCACA ATCACTGACG
ATTACCCATC CATACACTAA AGAGCCAATG ACCTTTAGCT GTGATGCGCC CTTTATGAAT
GCCGAGGGTG AGCAATAA
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| Protein sequence | MTDFVYSPPT TPWLEVLHQD KDIMVVNKPS GLLSVPGRDP AHADSTYTRV LAEFPHAKIV
HRLDMATSGV IVVALLRSAE SELKRQFRDR ETQKTYYARV AGHVKQSHGT INLPLICDWP
NRPKQKVDHK IGKPSQTHYE VISYGKRSTL VKLTPITGRS HQLRVHMMAL GHPILGDNFY
ADPLAKRLAP RLLLHAQSLT ITHPYTKEPM TFSCDAPFMN AEGEQ
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