| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0727 |
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| Symbol | |
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| ID | 5661126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 902279 |
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| End bp | 903409 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235272 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001500589 |
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| Protein GI | 157960555 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.1031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGACT CTAAAATCCC ATCATGGGTA AATATTATTG TTTTGCCATT GATTAATATC
TTTTTTGCCT TCGCCTTTGC GGCCGGTATT TTTATTGCGG TTGATGTGAA TCCGATAGAA
GCCGCTGGTG TAATGGTACG CGGCGCCTTG GGTTATCAAG AAGGTATTGG TTATACGCTT
TATTATGCGA CTAACTTTAT CTTTACCGGT TTAGCCGTGG CAATGGCATT CTCTGCAGGC
CTATTTAATA TTGGTGGTGA AGGTCAGGCC TATATGGGCG GCTTAGGTGT CGGGCTTGCC
TGTTTAGCAC TCGATAGCAC CTTGCCTTTC TGGGCATTGC TGCCAATTAC TATGCTTGCC
AGTATGTTGT TTGGTGCGCT GTTTGCGCTG ATCCCAGCTT ATTTACAGGC TTACCGCGGT
AGCCATATCG TGATCACCAC CATCATGTTT AACTTTATCG CGTCAGCGTT AATGGTTTAC
CTGCTAGTAA ACGTACTTAA GCTAGAAGGC CAAATGGCGC CGGTATCGCG TGTATTTGAA
GAAAGCGCTG GTTTACCCAT GTTCCATGAG ATGACCCAGT GGTTTGGCAT TTCTTTCTCA
CAATCACCCA TGAATCTAAG CTTCTTTATT GCGCTTATCT GCTGTGTACT CGTTTGGGCG
CTGCTGTGGC GTACCCGTTG GGGCTATGCA ATTCGTGCCA TGGGCGCGAG CCCAAGTGCG
GCTGAATATG GCGGCATTAA CTACAAGAAG CTGATCATTG TGGTGATGCT TATTTCTGGT
GCGCTTTCGG GCATGATGGG ATTGAACGAA GTTCAGGGCT ACAGCCAGCA GCTTAAACTG
GACTTTGTTG CCGGTTATGG CTTTACCGGT ATTGCAGTGT GTTTGATTGG CCGCAGCCAT
CCGATAGGGA TCATCTTAGC CAGTCTACTA TTTGGCGTGC TGTATCAAGG CGGCGCAGAG
CTGTCATTTG ACTACCCGAA TATTGACCGT GAGATGATCC AAGTCGTGCA GGCGTTAGTT
GTACTGTTTA GCGGCGCATT GGCATTGATG CTAGTTAAAC CGACTGAGAA GCTATTTGTG
TTTCTTAATC AAAAGAAAGC AGCCCTAGGC AGCGTTAAGG CGGAGGCATA A
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| Protein sequence | MNDSKIPSWV NIIVLPLINI FFAFAFAAGI FIAVDVNPIE AAGVMVRGAL GYQEGIGYTL
YYATNFIFTG LAVAMAFSAG LFNIGGEGQA YMGGLGVGLA CLALDSTLPF WALLPITMLA
SMLFGALFAL IPAYLQAYRG SHIVITTIMF NFIASALMVY LLVNVLKLEG QMAPVSRVFE
ESAGLPMFHE MTQWFGISFS QSPMNLSFFI ALICCVLVWA LLWRTRWGYA IRAMGASPSA
AEYGGINYKK LIIVVMLISG ALSGMMGLNE VQGYSQQLKL DFVAGYGFTG IAVCLIGRSH
PIGIILASLL FGVLYQGGAE LSFDYPNIDR EMIQVVQALV VLFSGALALM LVKPTEKLFV
FLNQKKAALG SVKAEA
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