| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0722 |
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| Symbol | |
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| ID | 5661121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 893397 |
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| End bp | 895187 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235267 |
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| Product | flavocytochrome c |
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| Protein accession | YP_001500584 |
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| Protein GI | 157960550 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACT TTAAAAAAGC AGTGTGTATT GCAACACTTC TAGGCTCAGC AGGCTTTATG
TCTACCGCGA TTGCCGCTGA TAACTTGGCT GAGTTCCACG GTGAAAACCA AGAGTGTGAT
AGCTGCCATA TGCCAGACGG TGAGCTATCG AACGACAGCT TAACCTATGA GAATGCGCAG
TGTGTATCTT GTCACGGTAC ACTGGCTGAA GTTGCTGAAG AAACTAAACA TGAGCACTAC
AATGCCCATG AATCTCATTT CCCTGGCGAT GTGTCTTGTA CTTCTTGTCA CAGCGCTCAC
GAAAAATCTA TGGTTTACTG TGACTCTTGC CATAGCTTCG ACTTTGACAT GCCTTACACT
AAGAAGTGGG AACGTCACGA GCCAAGCATC GATGAGTTAT TAAAAGACCA GTCTGACCGT
CAGGCGGCGC TAGCCGAAGC ACCACGTGAC ACAGTTGATG TTGTGGTTGT TGGTTCTGGT
GGTGCAGGTT TCTCTGCTGC CGTATCAGCA CACGATCACG GCGCTAAAGT GATTCTAATT
GAAAAAGAGC CAGTTATTGG TGGTAACGCT AAGCTTGCAG CCGGTGGTAT GAACGCCGCT
TGGACTGACC AACAAAAAGC GAAAGGCATC AAAGATAGTG TTGAGTCTAT GTACAAAGAC
ACTATGAAAG GTGGCCGTGA CTTAAACGAG CCTGCACTAG TTGAAGTATT AACTTCACAC
TCTAAAGGTT CAGTTGACTG GTTAACTGGC ATGGGCGCAG ATCTTAACGA CGTAGGTCGT
ATGGGTGGTG CTTCTGCTAA CCGTTCACAC CGTCCAACAG GTGGTGCAGG TGTTGGTGCT
CACGTAATCC AAGTGCTTTA CGATAACGCC GTTAAGCGTG ACGTTGATAT GCGCATGAAC
ACACGTGGTA TCGAAATCCT TAAAGACGAC AAAGGCAACG TTAAGGGCCT ACTCGTTAAA
GGCATGTACA AAGGTTACTA CTGGATTAAA GCTGACGCCG TTATCCTAGC AACAGGTGGT
TTTGCTAAGA ACAATGACCG TGTAGCTAAG CTTGATCCTA AGCTAAAAGG CTTTATCTCT
ACTAACCAAC CAGGTGCGAC TGGTGACGGT ATCGATGTTG CAGCAAATGC TGGCGCTGCG
ATGACTGATC TACAGTACAT CCAGGCTCAC CCTACGCTAT CTGTTAAAGG TGGTGTGATG
GTAACTGAAG CGGTTCGTGG TAACGGTGCA ATCTTGGTTA ACCGTGAAGG TAAGCGCTTC
GTTAACGAAA TCACCACTCG TGATAAGGCT TCTGCAGCTA TTCTGAACCA AACGGGTAAG
TCTGCATTCC TAATCTTTGA TGACTCAGTA CGTAAGTCTC TAAGTAAGAT TGATAAGTAT
ATCGGTCTAG GTGTTGCTCC AAGTGCTGAC TCGCTAGTTA AGCTAGGTGA GATGGAACAG
ATTGATGGTA AAGCTCTAAC TGAAACTGTT GCGCGCTACA ACAGCCTAGT GAAGAGCGGT
AAAGACGCAG ACTTCGGTCG TCCTAACCTA CCTCGTGCCC TTAACGAAGG TAACTACTAC
GCAATCGAAG TGACTCCTGG TGTTCACCAC ACTATGGGCG GCGTGAAGAT TGATTCTAAA
GCTGAAATCA TGAACGCTAA GCAGCAGGTT ATCCCAGGTC TATACGGCGC GGGTGAAGTA
ACTGGTGGTG TTCACGGTGC TAACCGTCTA GGTGGTAACG CTATCTCTGA TATCGTCACC
TTCGGTAGAA TGGCTGGTGA GAATGCAGCC GAGTACTCTA AAAAGAATTA G
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| Protein sequence | MKNFKKAVCI ATLLGSAGFM STAIAADNLA EFHGENQECD SCHMPDGELS NDSLTYENAQ
CVSCHGTLAE VAEETKHEHY NAHESHFPGD VSCTSCHSAH EKSMVYCDSC HSFDFDMPYT
KKWERHEPSI DELLKDQSDR QAALAEAPRD TVDVVVVGSG GAGFSAAVSA HDHGAKVILI
EKEPVIGGNA KLAAGGMNAA WTDQQKAKGI KDSVESMYKD TMKGGRDLNE PALVEVLTSH
SKGSVDWLTG MGADLNDVGR MGGASANRSH RPTGGAGVGA HVIQVLYDNA VKRDVDMRMN
TRGIEILKDD KGNVKGLLVK GMYKGYYWIK ADAVILATGG FAKNNDRVAK LDPKLKGFIS
TNQPGATGDG IDVAANAGAA MTDLQYIQAH PTLSVKGGVM VTEAVRGNGA ILVNREGKRF
VNEITTRDKA SAAILNQTGK SAFLIFDDSV RKSLSKIDKY IGLGVAPSAD SLVKLGEMEQ
IDGKALTETV ARYNSLVKSG KDADFGRPNL PRALNEGNYY AIEVTPGVHH TMGGVKIDSK
AEIMNAKQQV IPGLYGAGEV TGGVHGANRL GGNAISDIVT FGRMAGENAA EYSKKN
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