| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0720 |
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| Symbol | |
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| ID | 5661119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 889568 |
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| End bp | 890950 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641235265 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001500582 |
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| Protein GI | 157960548 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCG CCAGAAATAT TCTTCTTGTT GACGATGAAG CCTCTTGGCT TAGAACACTC
TCCATCACGC TTAATCGTCT CGTGCCAGAA GCGACTATCG ATACCTGTGT CGATAGTCGC
CAAGTGATGA GCCGATTGCA GACTGGCGAC TATGCGCTGG TACTGCTAGA TCTGACCATG
CCGTTTCATT CCGGCGAAGA CTTGCTTGAG ATGATCCGCA AAGAGTTTCC TAAGACCCGG
GTCATCATAG TCACGGGGGT TAACGAGGTC GACACTGCGG TGCGCTGCAT TAAAAACGGT
GCCTATGACT ACTTTATCAA AACAGACAAG GTCGACGATC TCGCCCGCAC CGTTCGCCGA
GCATTAGAAG TAGTAGGTCT TGAGCGTAAC TATCTACGAA TTAAAGAAAG CTTCTTAAGT
CGCACATTAA GCCGCCCAGA AGTGTTCAAT AATATCCTCA CCTGTGAACC CGCGCTGCTG
GATCAGTTCC GCTATTTAGA GGCCGTAGCC TTAAGCCCCG AGCCCATTCT TATTCAAGGG
GAAAGCGGCA CAGGTAAGGA TGAGTTTGCC AAGTCCTGTC ATCAGCTTAT TTGCGCCGAT
GCGCCCTTCA TTAACGTCAA CTTGGCGGGT ATTAGCACTT CGGCGTTCGA GCTACAGTTA
TTTGGCCAAC TGCATACCGA TGATGACGGC AAAGTTAGCG CTCAAGCAGG CGTGCTGCAC
CAAGTAAAAA ACGGCCTACT CTACCTCAAT GAGATTGGTG ATCTCCCCAT TGAGGCTCAG
GCAAAGCTTG TGGATGTGAT TGAGCATAAG CAGTATTACC CTATCGGCAG CGACAGAGCG
TACCCGATAT TGTGTAAAAT TATCACCTCC ACCCAGCACG ACCTGTTAGC GCTGAATCAA
GCGGGCAAGT TCAGGAGTGA CTTGTTATAT CGCCTACGCT CACACACCAT CAAGCTGCCA
CCGCTGAGGC AACGTAAGCT AGATCTGTCG ATGCTGATCA ACCACTTTAT TTGTTTAGCG
GCCAAAGAGA TGGGCTTATC AGAGCCCCAG CAACCGAGCT CGCTAGCGCA GCAGTTATCA
GAATATGCTT TCCCTGGTAA TTTACATGAG CTTAAAGGCA TGGTGTTTGA TGCAGTGAGC
CGTAGCGACG GTATTGCGCT GAATATCACG CCCTTTATGG AGGCGATAAA CCTAAGCAAG
TCGAACGTTA CCACTGACAG CGACCAGCTT ATCTTCCCTA AGATTTTGCC CACATTAGCG
CAGATGAGTG ACGCCCTCAT TCAAGAGGCG CTGAACCGCA CCGCCAATAA TCAAACTGCA
GCGGCGCAGA TGCTCGGCAT CAGCCAGAGT GCGCTAAGCC GTCGCATAAC TAAAGAAAAA
TAG
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| Protein sequence | MKLARNILLV DDEASWLRTL SITLNRLVPE ATIDTCVDSR QVMSRLQTGD YALVLLDLTM
PFHSGEDLLE MIRKEFPKTR VIIVTGVNEV DTAVRCIKNG AYDYFIKTDK VDDLARTVRR
ALEVVGLERN YLRIKESFLS RTLSRPEVFN NILTCEPALL DQFRYLEAVA LSPEPILIQG
ESGTGKDEFA KSCHQLICAD APFINVNLAG ISTSAFELQL FGQLHTDDDG KVSAQAGVLH
QVKNGLLYLN EIGDLPIEAQ AKLVDVIEHK QYYPIGSDRA YPILCKIITS TQHDLLALNQ
AGKFRSDLLY RLRSHTIKLP PLRQRKLDLS MLINHFICLA AKEMGLSEPQ QPSSLAQQLS
EYAFPGNLHE LKGMVFDAVS RSDGIALNIT PFMEAINLSK SNVTTDSDQL IFPKILPTLA
QMSDALIQEA LNRTANNQTA AAQMLGISQS ALSRRITKEK
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