| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0713 |
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| Symbol | |
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| ID | 5661112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 876103 |
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| End bp | 878292 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235258 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001500575 |
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| Protein GI | 157960541 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000508975 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACACC GTAATACGCG ATCTTTAAGT CTAATTTCAA CTGCGTTACT CGCCGCGCTC
TCACCTCAAG TCATGGCACA GGAGTCTGAC TCCCAACCGA CCATGGAACA GATCAGTATT
TTTGGTAAAC AGAATCCGCT CAATACCGCT CCGGGCAGTG CGCACCTCAT CACTCAAGCC
GAGCTAGATA ACTTCAAATA CACAGATATC ATGCGCACAC TTGCGAGCAT TCCCGGTGTG
TATATTCAAG AAGAAGATGG TTACGGTTTA AGACCAAACA TAGGTATGCG AGGCACTGGG
CAAAATCGCT CAGAAAAAAT CACCATCATG GAGGACGGTG TACTCGCTGC GCCGGCTCCC
TACGCGTCAC CTGCGGCCTA TTACTTCCCG ACTCCGGGCA GAATGCAATC AGTTGAGATC
CTAAAAGGAA GTTCGACCGT TAAATATGGG CCAAGGACCA CAGGCGGCGT GATCAATATG
CTATCTCGCC AAATCCCCGA AGAGGAGTTA GCGGGTAAGC TAGATGTCGC TGCAGGTCAA
GATGGCTTCG GAAAGTTACA TGCCTACGCT GGCGGCCAAG GAGAGCGAGT CGGGGCGGTA
ATGGAAATGT ACCGCTACCA AGCCGATGGC TTTAAGGATA TCAATGGCGT GGGTGGCGAC
ACAGGTTTTG AAAAGAACGA CGCGCTGGCA AAGGTCAGTG TGCGCTCGGC TGACGATGCT
AAATACGCTC AGGTGTTAGA GTTTAAGCTG AAATACTCTG ACGAAGTCTC CAATGAAACC
TATATGGGAT TAACCGATAG TGATTTAGAA ACGACACCCT ATGCTCGTTA CTCGGCCTCA
CAAAAAGATG TGATGAATAC TGAGCATAAA CAGTTACAGA TCAACCATAT TATCGACTTT
AGCGATAATC TCACCTTAGG GACGACAGCC TACTATAACG ATTTTGCTCG CAACTGGTAT
AAGGCCGATA AAGTTAATGG TCTTAAACTC AGTAAAGGAG GGGTTGAAGC CGCCTCTGAA
TTTGATAAAG ATCCATCTAT GGCTCCAATG GACGTAAGAG TTAAAGCCAA CAATCGAAGC
TATATTTCAC AGGGCGTTCA AACGGAACTG AACTGGTATT TAGCTAATCA TGATCTCGCT
TTCGGTGCTC GCTACCATGA AGATGAGATG GACCGATTCC AATGGGCCGA TCACTATACT
CTAGACTCAA ATCAGGTGAT GACCTTAAGT GAAAGCGGTA TTCCAGGCAC CGACTCTAAC
CGTATCGACA GTGCCAAGGC CATTGCTCTT TACGTTCAAG ATAAGATCCA GTTCGGCGAC
TTCAACATCA CTGCAGGTCT TCGCTACGAA GATGTAACGA CTAACCGTAC CGACTGGGGC
AAGGAAAATC CGGGACGTGA CGGCCAGCCA AATAAAGATA TCGACAACAG TTTTTCTGCG
ACCTTGCCTT CTCTATCTGC AACCTACCAA ATAAACAGCG AGCTTCTGGT TCTTGCTGGC
GTTCAAAAGG GCTTTGCCCC CGCCTCTCCA GGCAATGCCG ATAAAAAAGA GGAGCAGAGC
TGGAACTATG AAGCCGGAGC ACGTTATAAC AGCGGTGAGT TTAGCTCAGA AGCCATCTTC
TTCTACAGTG ATTACAGCAA CATGCATGGT GAATGTACCG CATCAAAAGG CTGCGATGAT
GACAATATCG GTGATCAGTA TAATGGTGGT GAAGTGGATG TTAAGGGACT GGAGTTAAGT
CTTGGCTATA GCTTTAACAC TCAAACTGAT TTCAGTTTTC CAGTGAAACT GGCCTACACC
TATACCGATG CGCAGTTTGC CAATAGCTTC GAGTCAGACT TCGATCCTTG GGGTGATGTC
AGCGAGGGAG ACAAACTCCC CTATATCGCT GAAAATATGC TGTTTGCATC GGCAGGGGTG
AAAGCTGATA GCTGGGAGCT GACTTTAGCT GCCCGTTACA CAGACGATAT TCGCACACAA
GCAGGCCAAG GCGAAATTGC AGCCGACAAT CTAATTAAGG CCAAGACTAT TGTCGATTTA
TCTGGGCGTT ACTTCATCGA TGATGCACAA GAGCTTTACC TTACTGCGGA AAACTTATTC
GATGAAAAAT ATGTCACCTC TCGAGTCTAT GGTTCCAACT TCGTAGGCAA ACCTATGACG
GTATCCGTAG GATATGCGTA TAAATTTTAA
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| Protein sequence | MSHRNTRSLS LISTALLAAL SPQVMAQESD SQPTMEQISI FGKQNPLNTA PGSAHLITQA
ELDNFKYTDI MRTLASIPGV YIQEEDGYGL RPNIGMRGTG QNRSEKITIM EDGVLAAPAP
YASPAAYYFP TPGRMQSVEI LKGSSTVKYG PRTTGGVINM LSRQIPEEEL AGKLDVAAGQ
DGFGKLHAYA GGQGERVGAV MEMYRYQADG FKDINGVGGD TGFEKNDALA KVSVRSADDA
KYAQVLEFKL KYSDEVSNET YMGLTDSDLE TTPYARYSAS QKDVMNTEHK QLQINHIIDF
SDNLTLGTTA YYNDFARNWY KADKVNGLKL SKGGVEAASE FDKDPSMAPM DVRVKANNRS
YISQGVQTEL NWYLANHDLA FGARYHEDEM DRFQWADHYT LDSNQVMTLS ESGIPGTDSN
RIDSAKAIAL YVQDKIQFGD FNITAGLRYE DVTTNRTDWG KENPGRDGQP NKDIDNSFSA
TLPSLSATYQ INSELLVLAG VQKGFAPASP GNADKKEEQS WNYEAGARYN SGEFSSEAIF
FYSDYSNMHG ECTASKGCDD DNIGDQYNGG EVDVKGLELS LGYSFNTQTD FSFPVKLAYT
YTDAQFANSF ESDFDPWGDV SEGDKLPYIA ENMLFASAGV KADSWELTLA ARYTDDIRTQ
AGQGEIAADN LIKAKTIVDL SGRYFIDDAQ ELYLTAENLF DEKYVTSRVY GSNFVGKPMT
VSVGYAYKF
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