Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0690 |
Symbol | |
ID | 5661089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 851518 |
End bp | 852294 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641235235 |
Product | ABC-2 type transporter |
Protein accession | YP_001500552 |
Protein GI | 157960518 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.809524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATGA AAGCGCTGTA TTTCACAGCT TTTAAAAGTA TCTTAACCAA AGAGATCAAC CGTTTTACCC GTATCTGGGT GCAAACTCTA GTGCCGCCAG CAATCAGTAT GACATTGTAC TTTTTGATTT TCGGTAACTT GGTGGGTAAG CGTATCGGTG ATATGGGCGG CGTCTCTTAT ATGGAGTTTA TCGCCCCTGG TTTGATCATG ATGGCAGTGA TCACTAGCTC ATATTCTAAC GTGGTGTCAT CGTTCTTCAG TGCTAAGTTT CAGCGTAACC TTGAAGAGTT GATCGTTGCG CCAGTGCCTC ATTATGTCAT TATTGCAGGC TACGTGGGTG GTGGTGTCGC CCGTGGTTTA TGCGTTGGTA CTATCGTTAC CTTAGTGGCC ATGTTCTTTG TCGACATTAG CATTCATCAT TTAGGACTAG TGGCGGTAAC CGTATTGTTG ACGGCTATTT TGTTCTCTCT TGGTGGCTTA ATCAATGCGG TGTTTGCCAA GAGCTACGAT GATATCAGTA TCGTCCCCAC GTTTGTGTTA ACCCCCTTGA CCTATTTGGG CGGGGTATTT TACTCGCTGT CTTTATTGCC TGATTTTTGG CAAGGTGTGT CGGCACTAAA CCCAATAGTG TACATGATTA ACGTGTTTCG CTATGGTTTC TTAGGCTATG CAGATATGAG TGTGCCGTTA TCCATCGGCA TCATGGTGGC TTTCTGCGCC GCTCTTTGGA GTGTCGCCTA CTACCTGATC TCTCGTGGTA TCGGCTTGAG AAGTTAG
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Protein sequence | MNMKALYFTA FKSILTKEIN RFTRIWVQTL VPPAISMTLY FLIFGNLVGK RIGDMGGVSY MEFIAPGLIM MAVITSSYSN VVSSFFSAKF QRNLEELIVA PVPHYVIIAG YVGGGVARGL CVGTIVTLVA MFFVDISIHH LGLVAVTVLL TAILFSLGGL INAVFAKSYD DISIVPTFVL TPLTYLGGVF YSLSLLPDFW QGVSALNPIV YMINVFRYGF LGYADMSVPL SIGIMVAFCA ALWSVAYYLI SRGIGLRS
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