Gene Spea_0690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0690 
Symbol 
ID5661089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp851518 
End bp852294 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content46% 
IMG OID641235235 
ProductABC-2 type transporter 
Protein accessionYP_001500552 
Protein GI157960518 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.809524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATGA AAGCGCTGTA TTTCACAGCT TTTAAAAGTA TCTTAACCAA AGAGATCAAC 
CGTTTTACCC GTATCTGGGT GCAAACTCTA GTGCCGCCAG CAATCAGTAT GACATTGTAC
TTTTTGATTT TCGGTAACTT GGTGGGTAAG CGTATCGGTG ATATGGGCGG CGTCTCTTAT
ATGGAGTTTA TCGCCCCTGG TTTGATCATG ATGGCAGTGA TCACTAGCTC ATATTCTAAC
GTGGTGTCAT CGTTCTTCAG TGCTAAGTTT CAGCGTAACC TTGAAGAGTT GATCGTTGCG
CCAGTGCCTC ATTATGTCAT TATTGCAGGC TACGTGGGTG GTGGTGTCGC CCGTGGTTTA
TGCGTTGGTA CTATCGTTAC CTTAGTGGCC ATGTTCTTTG TCGACATTAG CATTCATCAT
TTAGGACTAG TGGCGGTAAC CGTATTGTTG ACGGCTATTT TGTTCTCTCT TGGTGGCTTA
ATCAATGCGG TGTTTGCCAA GAGCTACGAT GATATCAGTA TCGTCCCCAC GTTTGTGTTA
ACCCCCTTGA CCTATTTGGG CGGGGTATTT TACTCGCTGT CTTTATTGCC TGATTTTTGG
CAAGGTGTGT CGGCACTAAA CCCAATAGTG TACATGATTA ACGTGTTTCG CTATGGTTTC
TTAGGCTATG CAGATATGAG TGTGCCGTTA TCCATCGGCA TCATGGTGGC TTTCTGCGCC
GCTCTTTGGA GTGTCGCCTA CTACCTGATC TCTCGTGGTA TCGGCTTGAG AAGTTAG
 
Protein sequence
MNMKALYFTA FKSILTKEIN RFTRIWVQTL VPPAISMTLY FLIFGNLVGK RIGDMGGVSY 
MEFIAPGLIM MAVITSSYSN VVSSFFSAKF QRNLEELIVA PVPHYVIIAG YVGGGVARGL
CVGTIVTLVA MFFVDISIHH LGLVAVTVLL TAILFSLGGL INAVFAKSYD DISIVPTFVL
TPLTYLGGVF YSLSLLPDFW QGVSALNPIV YMINVFRYGF LGYADMSVPL SIGIMVAFCA
ALWSVAYYLI SRGIGLRS