Gene Spea_0683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0683 
Symbol 
ID5661082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp844599 
End bp845309 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content45% 
IMG OID641235228 
Producthypothetical protein 
Protein accessionYP_001500545 
Protein GI157960511 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAT CAATTATCGC AGCCCTTATC TCAGGCCTTA TCGCTTCAAC GAGTATGGTT 
GGCACGGCTC AAGCCGCAGA TGTCGATTTT CCACACTTAA ACACAATAGG CACTAGCCAA 
CTCACCGTAA CAGCCGACAT GGCAGAGGTG AATGTTGAAG TGGTGATTAA AGCTAAAACG 
GCCCAAGACG CTAAACGTGA GTCTGATAAA GCTGTGGCTA ACTTTTTAGC CCGTCTTGAA 
AAGGCTGGGA TCGATAAAGC CCTTATTCAA AGCGCCAATA TCAACCTTCA ACCGCAATAC 
CATTATCAAA AAGACAAGCC AAATCAACTT ATCGGTTATA GCGCTAACCG CCGTATTACA 
GTTACAGTCA TGGATCTTGC CAAGCTCAAT AACATTCTCG ATTCAGCGCT AGAGCAAGGG 
ATCAACCGCA TCAATAATAT CGCCCTCAAA TCGAGCAAAG AGACTGAGTA TGTTGAGCAA 
GCTAGAATGG CGGCGATTAA AGATGCCCAG CAAAAAGCCA AGATGCTGGC CGAAGGCTTT 
GGTGAGAAAC TCGATGGCGT ATGGGAGATC AGCTATTTTG AGCAGCGTCC AATTCAGCCA 
GTGATGTTAA GAATGAATTC AGAAGCAAAA AGCTTCGATG CGGCTCCAAG CTATCAACAA 
GGCAAGGTTA CGATTCAAGA CAGAGTCGAA GTGACTTATC GTCTAAAATA A
 
Protein sequence
MKSSIIAALI SGLIASTSMV GTAQAADVDF PHLNTIGTSQ LTVTADMAEV NVEVVIKAKT 
AQDAKRESDK AVANFLARLE KAGIDKALIQ SANINLQPQY HYQKDKPNQL IGYSANRRIT 
VTVMDLAKLN NILDSALEQG INRINNIALK SSKETEYVEQ ARMAAIKDAQ QKAKMLAEGF 
GEKLDGVWEI SYFEQRPIQP VMLRMNSEAK SFDAAPSYQQ GKVTIQDRVE VTYRLK