| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0665 |
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| Symbol | |
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| ID | 5661064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 824369 |
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| End bp | 826093 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641235210 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001500527 |
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| Protein GI | 157960493 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTGAAT TGTGGGTGTT ATCGTGCATA TTGTTTGCCT TAGTCATCGC CTTAATGGCG
GGGCTATGGA CACCTGCTGC GCTGTTTTTT ATCGCATCGT TAACCACTTA CCTGCTTGGC
ATGGTGGAGC TTGAAACTGC GCTTTCAAGT TTTACCAATG CCAGCTTAGT CACTTTAGTG
CTGTTGATCA TGTCGACAGC CGCGCTAGAG AAGACATCGC TCCTTGGCAA GTTGAGTCAA
GTGATAGGGC GAGGCTCATT GGCATCGACC ATGGCAAAGC TTGGTATTTC AACCGCCTTG
CTGTCATCGT TTACCAATAA CACCGCGGTG GTGGCTTCGC TCATTGCTGT TGTGCGTAGA
AACCAAGCCC ATGCACCGGC TAAGTTGTTA CTGCCACTGT CTTACGCGGC GATTTTGGGG
GGCACTTTGA CCCTGATCGG CACCTCGACC AATTTGATTG TGAACTCCTT TGTCGAGAAC
GCGGGCTTGG TGCCTTTAGG CTTTTTTGAG TTTTCCATGA TTGGCATAGT GATTGTCACC
GCCGGCGTTG GTTTATTGGT GCTATTAGCC AATTGGCTGC CCGATAGACG CGATGAGAGT
CTGGATGAAG CCTTGCCCTA TCTGCTCGAA GCCAGAGTGG CGAAAGAGTC AAAGTTGATA
GGCAAGAGCG TACAAGATAA TCGCTTACGC GCGCTGAAAA AACTGTATCT GGTTGAGCTT
GAGCGCAGCG GCATTCGCAT CTGCCCGGTG CCGCCTCACT TGGTACTGCA AAGCGAAGAT
ATTTTACGCT TTAGTGGCGC GGTGGAATCG GTTGAATTGC TGCATCAATT CGACGGCCTA
GAGTGGTTTG GTAAACAGCA GGCAAAGGGA CAGAACCTGA TAGAAGCGGT ACTAGCACCG
AGTTCAACCT TAGTCGGTCG CTCATTAAAG CAGTCGACCT TTAGAGAGAA GTTTGATGGT
GCAGTACTCG CGATTCGTCG CGGTCATCAA CCTTTAAAAG GTGGTCTTGG AGACATAGAG
TTACAAGCGG GAGATGTGCT ACTCGTCACC CCTGGAGATG GTTTTTGCAG TAACACTAAG
TTGGCATCAG AGTTTGCCGC CGTAAGTGGT TTAGATTTGA GTGTCAGGCT GGATCCTCGC
CGCAGCCAAT GGGTACTAGC TGGCTTTCTA GTGACGATTT TGGCCAGCCT CACAGGTGTC
CTCCCTTTGG TTAAGGGGCT TATTTTGCTC TTGATGAGCT ATATCGCCAT CGGGGCGGTG
AGTTTATCTG AACTGAAAAG GCGTTTTCCT TTCGAGCTGG TGGTCATAGT CGGCAGCGCT
TTAAGCCTAG CTAATCTGAT GCTCTCGACT GGACTTGCCG ATGACATCGC CTCATTTATC
TTGGGGGCGA TTAATGGCTA CGGAGTATTT GCAGCGTTTG TGGCCGTGTA TTTTATGACG
CTGCTACTGA CAGAGCTTAT CACCAATAAT GCCGCTGCGG CGCTAGCTTT TCCGGTCGCT
TATGCCATCG CCCTGAGTTA CGGCGTCGAT ACTCGCCCGT TTATTTTAGC AGTGGTATTT
GGCGCCAGTG CTAGCTTTAT TTCGCCCTAT GGTTATCAGA CCAACTTGAT GGTCTATAAC
GCGGGCAACT ATCGATTTAG TGATTTTGTA CGTGTTGGAC TGCCGTTGTC GTTGCTGTAC
TCGGCAATTG TATTGTTATT GGTACCCGTG TTTTTTCCAT TTTAA
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| Protein sequence | MPELWVLSCI LFALVIALMA GLWTPAALFF IASLTTYLLG MVELETALSS FTNASLVTLV
LLIMSTAALE KTSLLGKLSQ VIGRGSLAST MAKLGISTAL LSSFTNNTAV VASLIAVVRR
NQAHAPAKLL LPLSYAAILG GTLTLIGTST NLIVNSFVEN AGLVPLGFFE FSMIGIVIVT
AGVGLLVLLA NWLPDRRDES LDEALPYLLE ARVAKESKLI GKSVQDNRLR ALKKLYLVEL
ERSGIRICPV PPHLVLQSED ILRFSGAVES VELLHQFDGL EWFGKQQAKG QNLIEAVLAP
SSTLVGRSLK QSTFREKFDG AVLAIRRGHQ PLKGGLGDIE LQAGDVLLVT PGDGFCSNTK
LASEFAAVSG LDLSVRLDPR RSQWVLAGFL VTILASLTGV LPLVKGLILL LMSYIAIGAV
SLSELKRRFP FELVVIVGSA LSLANLMLST GLADDIASFI LGAINGYGVF AAFVAVYFMT
LLLTELITNN AAAALAFPVA YAIALSYGVD TRPFILAVVF GASASFISPY GYQTNLMVYN
AGNYRFSDFV RVGLPLSLLY SAIVLLLVPV FFPF
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