Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0653 |
Symbol | |
ID | 5661052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 808052 |
End bp | 809848 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641235198 |
Product | sulfite reductase (NADPH) flavoprotein, alpha chain |
Protein accession | YP_001500515 |
Protein GI | 157960481 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
TIGRFAM ID | [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.988648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGTTAA AAGAGCTTTC ATCACTCGCT TCGCCGCTAT CTAGTAGCCA AGTGGACAAG TTAAAGCAGC TCACTGCAGA GCTGAATGCC GTGCAACTTT CTTGGGTTAG CGGCTATCTT GCTGCAACAT CTGAGCAGGG AGTGGCAGGC TTGCCTCTGG TTGAGGCTGG CTCGCAATCT GGAGCTGAAC AAACCATCAC TATTCTCTAT GGTAGCCAGA CGGGGAATGG TCGCGGTATT GCCACCGAAC TTGCCGAAAA GGCGCTGGCG CAAGGGTATG CGGTCAACCT CGTCTCTATG GGAGATTACA AGACACGACA GCTTAAGCAG GAGAGTCTGC TCTTGTTAGT CGTAAGCACC CATGGCGAAG GTGAAGCGCC AGATGATGCT ATCGAACTAC ATAAGTTCTT AAGCTCTAAA CGTGCCCCAA AACTGGATAA CCTTAACTAC TCAGTGCTGG CGTTGGGTGA TTCAAGTTAT GAGTTTTTCT GTCAAACAGG TAAAGACTTC GAGACTCGTC TTAACGCATT AGGGGCGACT TCGATTGCGC CTCTGGTCGA GTGCGATGTC GACTATGAAG CTCAAGCCGA GCAGTGGCAA GCGGATGTGT TAGAGGCGGT GAAGCCATTA GTGCAGAGCT CAGGAGCCAG TGTGGTCTCT ATCGCTAGCT CTCAGACATC AGGCTCTAGT TACACCAAAC AAAAGCCCTA CACGGCAGAA TTGCTGGTGA GTCAAAAACT AACTGGCCGC GACTCTGATA GAGACGTGCG CCATGTTGAA ATTGAGCTGG GTGAGTCAGG AATAAACTAC CAAGCCGGTG ATGCACTCGG CGTATGGTTT ACTAACTCAC AAGAACTGGT TGCTGAGCTA CTCGAAGCCT TAGCGCTCGA TGGCGATGAG TCTGTCTCTG TTGGTAGCGA TAGCTTGAGT CTGCGTGAAG CGCTAACCAG TAAGAAAGAG CTGACCCAGC TTTATCCAGG TTTAGTCACT GGTTGGGCGG AACTGAGTCA GAATGCTGAG CTGTTGGCCA TTAGCGCCGA TAAAGCGTTA ACCCGAGAGT TTGTCAATAA CAATCAAGTG GCCGATCTAG TTCGTCAGTA CCCGGCTAAG GTGGCTGCAG AGCAGTTTAT TGAGCTACTG CGCGGCATTA CCCCAAGACT CTACTCAATT GCATCGAGTC AGGCTGAGGT CGAGTCCGAG GTGCACTTGA CCGTGGCGCT GGTCGAAGAT GAACGTGATG GTGTAACCCG CTTTGGTGGT GCATCTCAGT TCTTAGCGGC CGCCGAAGAG GGTCAAGAAG TACAAGTTTA TGTCGAGCCT AATAATCACT TCCGTCTACC AGAAAACCCT GAAACGCCGG TGATCATGGT GGGCCCTGGC ACAGGTGTGG CTCCTTTCAG AGCCTTCATG CAAGAACGTG CTGCACTGGG CGCCGAGGGT AATACTTGGT TGATCTTCGG TAACCCGCAT TTTGAGCAAG ACTTCCTCTA CCAAACAGAG TGGCAGCAGT ATCTGCAAAG CGGCGAATTA TCGCGTATCG ACTTGGCGTT TTCACGGGAT CAAGAGCACA AGATCTATGT GCAGCACAAG ATCGCCGAGC AAGGTGAGGC GCTTTGGCAA TGGTTAGCGT CCGGTGCGCA CTTCTATGTC TGTGGTGACG CCGAACGTAT GGCGAAAGAT GTCCACCAAG CGCTGCTCGA TGTGGCCGTT AAATACGGTA ATAAAACTCA AGAGCAAGCG GCTGAATATC TCGAAGAGCT AAGAGCGGCC AAGCGCTATC AAAAAGACGT TTACTAA
|
Protein sequence | MLLKELSSLA SPLSSSQVDK LKQLTAELNA VQLSWVSGYL AATSEQGVAG LPLVEAGSQS GAEQTITILY GSQTGNGRGI ATELAEKALA QGYAVNLVSM GDYKTRQLKQ ESLLLLVVST HGEGEAPDDA IELHKFLSSK RAPKLDNLNY SVLALGDSSY EFFCQTGKDF ETRLNALGAT SIAPLVECDV DYEAQAEQWQ ADVLEAVKPL VQSSGASVVS IASSQTSGSS YTKQKPYTAE LLVSQKLTGR DSDRDVRHVE IELGESGINY QAGDALGVWF TNSQELVAEL LEALALDGDE SVSVGSDSLS LREALTSKKE LTQLYPGLVT GWAELSQNAE LLAISADKAL TREFVNNNQV ADLVRQYPAK VAAEQFIELL RGITPRLYSI ASSQAEVESE VHLTVALVED ERDGVTRFGG ASQFLAAAEE GQEVQVYVEP NNHFRLPENP ETPVIMVGPG TGVAPFRAFM QERAALGAEG NTWLIFGNPH FEQDFLYQTE WQQYLQSGEL SRIDLAFSRD QEHKIYVQHK IAEQGEALWQ WLASGAHFYV CGDAERMAKD VHQALLDVAV KYGNKTQEQA AEYLEELRAA KRYQKDVY
|
| |