| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0630 |
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| Symbol | |
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| ID | 5661030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 780304 |
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| End bp | 781275 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641235176 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_001500493 |
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| Protein GI | 157960459 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.31258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTGT CAACTTCTCA GCCATCTTGG CCTCTTAATG GACAACAGCC TGAGCTGCTT
TTTTCACAAT TATCTCACTT AGGTTTAATC TCTGTCACTG GCGAGCAGGG TCGCAGCTTT
ATTCACGGCC AAGTCACCAC AGATATCAGC TCACTAGAAA ATGACCAATG GCGCTGGGGC
GCGCACTGCG ATCCTAAAGG TAAGATGCTA GCCAGCTTTA GAACCTTCGC TAAAGATGAC
ACCCTTTTCA TTATGATGCC AAAAGACACC TTGGCATTAG ATTTACCACA ACTGCAAAAG
TATGCGGTAT TTAGCAAAGC AGAATTAGCC GATATCAGTG ATGCTTGGTT ACTGCTTGGC
GTTGCAGGCG AGCAAGCAAA TGCTTGGCTA ACGGCGCAGT TTGGTGAGCT GAGTGCAGAG
CTAACATTAA TCGATGGCGG CATAATCCTC CATGATGCGG GTCGTTATAT TGTGGCTATC
GACAAGACAC ATGCTGACGC ATTTATCGCT AAAATCGAAC AACCTATCTT TGATGCAAGT
GCATGGCAAA CACTGGAGAT CCTAGCGGGT TACCCAAACC TAGGAGCCAG CCATCAAGGC
CAGTTTGTAC CGCAGATGTG TAACGTACAG GCTGTGAATG GTATCAGCTT CAATAAAGGC
TGCTACATGG GGCAAGAGAC AGTGGCTCGT ATGAAGTACC GTGGTGGTAA TAAGCGCGCA
CTGTATATTG TTAGCGGCAA AGTATCAGCG CCACTCACAG CCGACAGCCA ACTCGAAATA
GCGTTGGAAG ACGGTGAAGG ATTCCGCCGC GCAGGTACCA TCATCGAGGC GGTTCAACGT
GATGGCCAAG TGTTATTAAC AGCCGTACTG GCTAACGATA CTCAGCTTGA TGCCAAGCTT
AGAGTAGCCG GTGATGAAAG CTCAGAGCTA ACACTGATTG CCTTGCCTTA TTCTCTAGAA
GATCAAGATT AA
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| Protein sequence | MTLSTSQPSW PLNGQQPELL FSQLSHLGLI SVTGEQGRSF IHGQVTTDIS SLENDQWRWG
AHCDPKGKML ASFRTFAKDD TLFIMMPKDT LALDLPQLQK YAVFSKAELA DISDAWLLLG
VAGEQANAWL TAQFGELSAE LTLIDGGIIL HDAGRYIVAI DKTHADAFIA KIEQPIFDAS
AWQTLEILAG YPNLGASHQG QFVPQMCNVQ AVNGISFNKG CYMGQETVAR MKYRGGNKRA
LYIVSGKVSA PLTADSQLEI ALEDGEGFRR AGTIIEAVQR DGQVLLTAVL ANDTQLDAKL
RVAGDESSEL TLIALPYSLE DQD
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