Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0628 |
Symbol | |
ID | 5661028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 773739 |
End bp | 779036 |
Gene Length | 5298 bp |
Protein Length | 1765 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641235174 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001500491 |
Protein GI | 157960457 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAGAC TTCGTACCTT TCGTAGCCGA ATTTTATCGC AAATGGCGCT GCCTCTTATC GCCATTATGG CAGCGGTATT TAGTGTCAAT GCTTGGTTTA ATTATCAAGA TGAAGAGCAA GACATTTACC AATACATTGG TCAGAAAGCA GAGGGGGCAG CTCTACGTTT ACAGCATTTG TTAGTCACTG CAGAAACCGA TACCCGTTCA TTTTCCGAGT TCTTGACTGA GATGAGCAGT CGTGAAGAGC TTGCCGATAA AGATAAGTTG CAACTTCTAT TAACTCAACG CCTCGAACGC CATGCTGATT TCTATGGCAG TGCTATCGCG TTTCAAAAGC ACTTTATTCC AGGTCGTGAG CTGTATGCAC CCTATGTTTA TCGAGATAAA ACTAACATTG GTATGATGGA TATCGGCGCC GAAGGTTACG ATTACACAAC CGGTGAGTGG GACTGGTGGA GCCGCGCCAT CGACGATATC AGGGGCTATT GGACTCCCCC CTATCTCGAT GAGGGCGCGG GTAATGTATT AATGGTCAGT TTCTCGCAGC CGTTTGGTGA TACACGACCT TTTACGGGCG TGGTTACCGT CGATCTGGCG TTAAACTCCA TTCCGCAGAT GGTGGGAGTA TCGGCTAAGC GGATCGTGGT AATTGATGAT AATGGCCAGC TCATCTACCA TGCCAATAAT CGCTTGCTGC TTGAGAGTAG CGCCGATAAA TGGCTGTCTC AATCTAAGCA AAACCAGGAT TTCATTGACT TAGTTAACCG AGGTAAGCCG GGCTACTCCT ATATAGAAGA TAGCGCAGGT GGCAAATACC TTGCCAGTGT TGGCGTAGTC CCTGCGCTGA ATTGGCGGGT GGTGATCATG ACATCTGAGG GGCTGCTTCA TGGTGAATTT TTCCGTGATT TCACTGCCTT GAGCCTCAAC CTGATATTAC TTTCTATTCT GCTTCTACTG ACTGGATATA TCACCTCTAG GCGCTTGACC CGACCGATAG AAGAGCTAGA GGCGGGCATA GTTGCTTTTG GTGCTGGGGA GACGAAGCGG ATTGCAAAGC CCCGCGGAGC GGCGAGTGAG ATAGCCACCT TAACCGATAA GTTTAACGAA ATGGCTGAGG TGCTAGAGGA GCGAGAGGCG GCGTTGCTGG ATTCTCGCGG TAATCGCTTC GCAAAGTTAA TTGATGGCAT GAGTGATAAG TCTTTCTATT GCTCTGTTGC CCCCGATGGC TTGCTGGATC AGGTGAGTGA TGGCGTCGAG AAGGTGTTGG GAGTCGCACC GGAGCTTCTT AAGCGCAAAT ATCAGAGGAT GTTTTCTGAC AATCCCATCA ACGAGCTTAA TTGGCAGTAT ATGGACAGGG CGTTGCTAGG GGAAAATGTG CCACCGCACC AGATTGAGAT GCTCGATGGC TTCGGTAAGC TCCGGCGCTT AGATGTGTTT ATGCAGCCTT TGCTATCTGA TAATCAACAA CTGCTCTCCA TCGAGATGTT ATTTAATGAT GTGACCGAAC AGTTTTCTGC CGTTGCTTGG TCAAACGCCG TGCTTGAGTC TGCGCCTGAG GCGATGCTGA TTGTCGAAGA GTCGGGACAG TTAGTGTTTA CCAACAGTCG TTGTCAGCGG CTGTTTGGCT ACGATGAGCA GCAGATGTTG GCGATGTCGG TGGACGAGTT AGTGCCGGAA GCCGTTAGAG AGCAACATGC GGATCTACGA GCTCAGTTTG TGGCAGAGGG ACAAGATCGC AAGATGGGGC TAGGGAAATC GTTAAAGGCT CGTAAGAGCG ATGGTGGCGA GTTTCCGGTG GAGATCTGTC TAGGTCTACT GCCAATTGCT GATGATGGTC AGCGTCAGGT GGCCGCAACG GTTAGAGATA TGACCCTTGA GCTTGAGATT GCCCAGCAGA TCAAAGATAG CGAGAGTCGC TTTCGAGGCT TAGTGGCTAA TATTCCTGGC GCTGTCTACC GCACTCGCGT TGGCGATAGC TGGGTGATGG AGTATATCAG CAGCAATATC AGCGATATTA CAGGGTTCCC TGCATCAGAC TTTATTGAAA ATAGTCATCG TAGCTTTGCC AGTTTAATCA TCGAGCAAGA TCTGGCGGCA ACCACACAAG CCATAGAGCA GGCACTTTTA AAACAAAAGA GCTTCGAAGT GCAGTATCGC ATCAAGCACA GAGATGGCAG CATCCATTGG GTGCATGAAA AAGGCAAGGC TATCTACAAT GATGATGGGG TGGCGCTCTG GTTTGATGGC AGCATAAATG ACATCACCAG CAGCAAGTTG GCCCAAGAGA AGATCGCCCA ATCTCAACAG CAGTTAGAGA CGATCACCGA GTCGATCCCC AGCACGGTTT ATCAGCTGCA TTGGTGCAAT AACAAGGATC GCACCTTTAC CTTCCTATCC AGCGCCTGTA TTACGACCTT AGGTTTTCAC CGTGACGAAG TGATGAGTAA TTTTGACTTG GTTGCTGAGT GTATTATTAG TGAGGAGCGC TCACATATTA TCGAGGCGCT GTCGGGTAAG AGCAGTAAAG GTCTACAGTG GACCGAAGAG TTTAGATATC GCCATCCTAT CGGTGATATC CGCTGGCTAC AGGCGGGGGC TCAGGGAGAT CTTCAGGCCG ATGGCTGCAT TATCTGGAAC GGTTACTTGA TGGATATCAC CGACCGTAAA CAGATAGATA TGGATCTTGA AGATCGCGAG GCGCACTTCA GGGCGCTGTT CGATAATGCC GGCATCGGTA TCGTCAATGT CGATGAGCGT GGCAACATTC TCGATTGTAA TGAGCAGTTT AGTCTGTATA TGCAAACCGA TGTTGCTCAT TTAAAGAGCC GTTCTTTCTT CGATTTTCAA CACAATGATG ATCGTGATAA AGCCAGGAGC GTATTTGCCA AACTCATCGA AGGTGGCAGT GACAATATAC TCACCGAGCT GAGACTGCTT AATCAGTCTG GTGAGTGTAT GTGGATGGAT ATCACCCTGA CTAAACTACA AGATAAACAC GGTAAGTTAA CCTCTGTGGT GCTGTCGATG GCTAATATCA CCTCGCTAAA GCAACTTTCG GTGGCACTTA AACAGGCTAA GGATAGCGCG GATGCGGCCA ATCAAGCCAA GAGTGACTTC TTGGCCAATA TGTCCCATGA AATCCGTACT CCGATGAATG CCATCATAGG CATGTCGCAA CTCTGCTTAC AGACCGAGTT GGATGCAAAA CAGCAAAACT ATATACAGAA AATAGATAGA GCCTCTAAGT CTCTACTTGG CATTATTAAT GATATTTTAG ATTTTTCTAA GATAGAGGCG GGCAAGTTAG ATATCGAGTC TGTCGATTTC CAGCTCGATA CTCTCCTTGA AGATCTCAGC GATATGTTTT CGGTCAAGGC GAGTGATAAG CGTCTCGAGC TACTCTTTGC CGTTGCCCCC AATATTCCAA GACATTTGCT AGGCGATCCA CTGCGTCTAA GTCAGGTGCT GATCAATCTA ATGAATAATG CCATCAAGTT TACCGAGCAG GGCGAGGTGC TGCTGTCGAT TAGTCAGTTA GAGCGCGTCG AAGATGACAT AGTGCTTAGA TTTAGCGTCC GCGATAACGG TATTGGTCTC ACTGAGGAGC AGCGTAACCG ACTGTTTAAG TCCTTTAGCC AAGCTGATAC CTCAACCACC CGAAAATATG GTGGAACGGG ATTAGGCCTT GCCATCAGTA AGCAGCTAGT AGAGCTAATG GGAGGGGAGA TAGGGGTTGA AAGTCAGTTT GGTAATGGCA GTACCTTTTT CTTTAGTGTG AGGCTGAAGG TTGCCGATAA TAAGCTGTTA AAGGTTAAAC ATGAGATCGA AGGGATGCGA ATCTTAGTGG CCGATGATAA CGCAACCGCC CGCGATATTC TGCGCACGAC TCTTGAGAGT ATGGGTTTTG TAGTGGATGC AGTTAAGAGT GGTAGCGATG CCATCGAGCG TTGCCAACAT ACTCACTATC CGGTTGCCCT TATCGACTGG CAGATGCCGG AGATGAACGG ACTTGAGGCG GCCGAGGTCA TTTTTGCTGA GCAAGAGACT CCCCCTAAGG TGTTGATCGT ATCGGCCCAT GCCAATGCTG AATTTCTCGA ACAGATTGAG CGCAGTGGCA TCGCGGGTTA CATCACTAAG CCTATCAGCG CCTCGCGACT GCTGGACGGA ATTATGTCCT CGCTTGGGAA AAACGGCACC ATGGCGGTTA GGCGTCAGGG AGCCGATATC AGCCAAGAGC TATTAGGCCA GTTACAGGGC AAGCGAATTT TGCTGGTGGA AGACAATGAC ATGAATCAAG AGGTCGCGAC CGAGTTTCTT GAGCAGGTCG GTGTGGTGTT GTCCATTGCT GATAATGGCC AGATAGCACT GGAGAAGTTG GCGATGCAAA GCTTCGATCT GGTATTGATG GATTGTCAGA TGCCTGTGAT GGACGGTTAT CAGGCGACAC GAGAGCTAAG AAAGCTCCCC GGATTGGCTA ATCTACCTGT AATTGCGATG ACGGCGAATG CGATGGCGGG AGACAGGGAG ATGTGTCTAG ATGCAGGCAT GAACGACCAT ATTGCTAAGC CAATCGAAGT GTCCTTACTC TACAGCCGAC TACTGCAATA CCTTGGAGAT GGCTCAAAGA GTGTATTGCC GTCCGATCTT CAAGCGCAGC AGACCCAAGA GCTGCTGTTT TGGCCGCAAC ATGAGGCGCT TGATATCGAC AAAGGTCTGC AATTAGTACA GAACTCTGTG CGGCTTTATC GGCGGATCTT TGAGCGTTTC TACAGTGGTA AGCGCCATAT CGCCGAGGAT ATTGAGTCAG CGCTTAGCCA AGGTAAAACC GATGACGCCA TACGTTATGC TCACACGCTT AAAGGGGTGT CAGGTAACTT ATGCTCGCCT GATTTAGTGA GCCTGGCAGC TCAAGTTGAG GCTAAGCTTA TTGACTCATC GACGGCGGAT GTGAGCGATG AAGTAGCTAA AATCGCCGAG TTAACAGTAT CGATATGTGC GGCGATTGCA GACTGGATGC ATCATCTAGA TAGCAATGAC CGAGATGAGA GTGCTGATGA CAAAAAGCCG CAGATGTCAG AGCCTGAGCT GCAACAGGCG GTGAGTGAGC TGTTACAGAT GCTAGAGGAG GCAGACTCAG ATGCTGTCGA TAAAATGAGT GAGATAAGGG AGCGGGTCTC TGAATCGTTA TGGAAAAAGA TGAGTCCGGC GGTAGCCATG GTCAATAGCT ATCAGTTTGA TCAAGCAGTC GACTTGATCC ATGCTCTGTT TAATGCAGGC TCACCAACCA AAGACTGA
|
Protein sequence | MSRLRTFRSR ILSQMALPLI AIMAAVFSVN AWFNYQDEEQ DIYQYIGQKA EGAALRLQHL LVTAETDTRS FSEFLTEMSS REELADKDKL QLLLTQRLER HADFYGSAIA FQKHFIPGRE LYAPYVYRDK TNIGMMDIGA EGYDYTTGEW DWWSRAIDDI RGYWTPPYLD EGAGNVLMVS FSQPFGDTRP FTGVVTVDLA LNSIPQMVGV SAKRIVVIDD NGQLIYHANN RLLLESSADK WLSQSKQNQD FIDLVNRGKP GYSYIEDSAG GKYLASVGVV PALNWRVVIM TSEGLLHGEF FRDFTALSLN LILLSILLLL TGYITSRRLT RPIEELEAGI VAFGAGETKR IAKPRGAASE IATLTDKFNE MAEVLEEREA ALLDSRGNRF AKLIDGMSDK SFYCSVAPDG LLDQVSDGVE KVLGVAPELL KRKYQRMFSD NPINELNWQY MDRALLGENV PPHQIEMLDG FGKLRRLDVF MQPLLSDNQQ LLSIEMLFND VTEQFSAVAW SNAVLESAPE AMLIVEESGQ LVFTNSRCQR LFGYDEQQML AMSVDELVPE AVREQHADLR AQFVAEGQDR KMGLGKSLKA RKSDGGEFPV EICLGLLPIA DDGQRQVAAT VRDMTLELEI AQQIKDSESR FRGLVANIPG AVYRTRVGDS WVMEYISSNI SDITGFPASD FIENSHRSFA SLIIEQDLAA TTQAIEQALL KQKSFEVQYR IKHRDGSIHW VHEKGKAIYN DDGVALWFDG SINDITSSKL AQEKIAQSQQ QLETITESIP STVYQLHWCN NKDRTFTFLS SACITTLGFH RDEVMSNFDL VAECIISEER SHIIEALSGK SSKGLQWTEE FRYRHPIGDI RWLQAGAQGD LQADGCIIWN GYLMDITDRK QIDMDLEDRE AHFRALFDNA GIGIVNVDER GNILDCNEQF SLYMQTDVAH LKSRSFFDFQ HNDDRDKARS VFAKLIEGGS DNILTELRLL NQSGECMWMD ITLTKLQDKH GKLTSVVLSM ANITSLKQLS VALKQAKDSA DAANQAKSDF LANMSHEIRT PMNAIIGMSQ LCLQTELDAK QQNYIQKIDR ASKSLLGIIN DILDFSKIEA GKLDIESVDF QLDTLLEDLS DMFSVKASDK RLELLFAVAP NIPRHLLGDP LRLSQVLINL MNNAIKFTEQ GEVLLSISQL ERVEDDIVLR FSVRDNGIGL TEEQRNRLFK SFSQADTSTT RKYGGTGLGL AISKQLVELM GGEIGVESQF GNGSTFFFSV RLKVADNKLL KVKHEIEGMR ILVADDNATA RDILRTTLES MGFVVDAVKS GSDAIERCQH THYPVALIDW QMPEMNGLEA AEVIFAEQET PPKVLIVSAH ANAEFLEQIE RSGIAGYITK PISASRLLDG IMSSLGKNGT MAVRRQGADI SQELLGQLQG KRILLVEDND MNQEVATEFL EQVGVVLSIA DNGQIALEKL AMQSFDLVLM DCQMPVMDGY QATRELRKLP GLANLPVIAM TANAMAGDRE MCLDAGMNDH IAKPIEVSLL YSRLLQYLGD GSKSVLPSDL QAQQTQELLF WPQHEALDID KGLQLVQNSV RLYRRIFERF YSGKRHIAED IESALSQGKT DDAIRYAHTL KGVSGNLCSP DLVSLAAQVE AKLIDSSTAD VSDEVAKIAE LTVSICAAIA DWMHHLDSND RDESADDKKP QMSEPELQQA VSELLQMLEE ADSDAVDKMS EIRERVSESL WKKMSPAVAM VNSYQFDQAV DLIHALFNAG SPTKD
|
| |