Gene Spea_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0627 
Symbol 
ID5661027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp772719 
End bp773387 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content49% 
IMG OID641235173 
ProductABC transporter related 
Protein accessionYP_001500490 
Protein GI157960456 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGTG AGATTGTCAG GCTGAGTCGG GTCTCAAAAG GCTTTAACGA TGGCGATAAA 
TATCATCAAG TATTAGATGA TATTAACCTT AGCCTCAATA TCGCCGATAC GGTGGCATTA 
ACCGGCCCAA GTGGTAGCGG AAAGAGTACC CTGCTCAATA TCATTGGTGG CTTTGAATTT 
ATCAAGCAAG GCCAGTTACT GCTCAACGAA AATGACACCA CACACTGGCA AGATAAGCAA 
TGGAGCCAAT TTAGGCGCCT GCATCTAGGG GTCGTTTTTC AACAGTTTAA TCTGCTCACC 
CCGCTCAACG TCCGCGACAA TATCGCCTTT TCATTACGCT TAAATCAGCA AAAATGGACC 
CCTTGGTGCG ACTACCTTAT TGAGCAACTC GGACTCAACG ACGTTATAGG TCGCAATGTC 
GAAACCCTAT CTGGCGGTCA GCAACAGCGC GTTGCCATCG CTCGCGCCCT CGCTCATAAG 
CCGAGGCTGT TACTCGCCGA TGAACCGACG GGAAACTTAG ATGAGAAAGC CGGTCAACAG 
GTGATGAGGT TGCTCACCCA GCTCGCTAGA GAATCTAACA CCTGTGTCTT AATGGTCACT 
CACAGTAGTG ACTGCGCCGC CTTTATGAAG AGGCGCTGGC ATCTAGAACT GGGAAAGATC 
CATGAGTAG
 
Protein sequence
MASEIVRLSR VSKGFNDGDK YHQVLDDINL SLNIADTVAL TGPSGSGKST LLNIIGGFEF 
IKQGQLLLNE NDTTHWQDKQ WSQFRRLHLG VVFQQFNLLT PLNVRDNIAF SLRLNQQKWT 
PWCDYLIEQL GLNDVIGRNV ETLSGGQQQR VAIARALAHK PRLLLADEPT GNLDEKAGQQ 
VMRLLTQLAR ESNTCVLMVT HSSDCAAFMK RRWHLELGKI HE