| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0626 |
|---|
| Symbol | |
|---|
| ID | 5661026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 770189 |
|---|
| End bp | 772726 |
|---|
| Gene Length | 2538 bp |
|---|
| Protein Length | 845 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641235172 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001500489 |
|---|
| Protein GI | 157960455 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCC CTGTAAGAAG ACAGCACGGG CTAACAATAC GGTTAAGTTT AGGGGTATTC
GCACGTCATT ACCTTAAGTC GCCACTGCAA GCCGGAGCGA TTATCTTAGG GGTCATACTT
GCCGTCACCC TACTCATTGG GGTTAGAGCG ACCAATGAAA ATGCCGTTCG CAGTTACTCA
GAAGCCACCG AGTTATTAAG TCAAAGGGCG CAGTTACTGC TCACACCAAT TAGTGGTCAG
AAATCAGTTG ATGAGTCGGT TTATTTTACC CTTAGACAGG CTGGCATCAC TCAGGCCTTA
GCCGTGTTAA CTGGCACTGT GACCGATGAC CAAGGTCAGC GCTGGGATAT TCAGGCCAGC
GATCTGGTCG CGGCGCTGTC GATACAAGCC AAGCAATCAA CGCCAAAACA TGCCGCTACA
GGCTCGAAAG AACTCTCTCT CTTCTCTGCC GACCTTCCCC TCGCGAAGCT GTTATCGGGA
GCCCCTTACA TCTTAATGAG CGAAAGCTTC AGCGCTCAAG TTGCCCCTCA AGGCACCATT
GAGCTCAACG GCTGTCAACT GAATGTGATA TCCCTAAGCG ATGAACTTGG GCTCAGCAAC
GCCATCTTGA TGGATATCTC CCTCGGGCAG AAGCTGCTAA ACCAAGCGGG AGAACTCAGC
TATATCGCCC TGTTTGCCAA CCCCAATCAT TTAACCAAGC AGATCCAGAA ACTGTTTAAT
CAACAAACTC GCCAGCACTT TATCTTTACT CTGCAAGATG ATGGTGAAGG CCTGACGAGT
CTGACACGCA GCTTTCACCT CAATCTCACC GCCATGAGCC TACTGGCATT TATCGTCGGC
CTGTTTATCG CTTATAACGG CGTTCGCTAC AGTCTACTCA AGCGCCAAAA GCTGTTGGTA
CAGCTGCAAC AGCAGGGCGT GCCGCAACGA GCCTTGCTAC TCGCCCTGCT TTTTGAACTG
CTGATATTAG TGCTTATTGG CTCATTAGTT GGCTTCATTC TCGGCCTGCA ACTCAGCCAT
TGGCTACAAC CTATGATTGC ACTCACCCTC GAGCAACTCT ACGGCGCAAG ACTGATGCCG
GGAGCTTGGC AATGGAGTTG GCTATATCAG GCTATCGGCT TGACTCTTTT CGCGGCTTTA
TTGGCTTGCT ACCCATTATT TAATACCTTA GCCAAACAGC CGTTAGCCCG CTGTGCGAGT
CGATTCGAAC AGCTAGTCCA CGCAAAGAAA CAGCAACTGA GGCTCTTTTT CATTGGCTTA
ATCTTGTTAA CTGTCGCCGC AGGATTGTTT CCGCTGACGC AGGACTATCA ACATAGCCTC
GCCTTGATAG GCGTTGTCAC CATTGCCATG CCGCTGTTAT TACCCATGGT GCTGCAAGTA
AGCTTGTCGC TTGTAGAGCG AGTGGCTCAA ACGGGGTTAT GGCAATATGC CGTAGCCGAG
AGCAAGGAGC TTATCGCGCC GCTTTCTCTC GCCATGATGG CGATGCTGTT GGCGCTTACC
GCCAATATCT CGATGAACAC CTTAGTGGGT AGCTTTGAGA TCACCTTAAA GCACTGGCTC
GATGACAGGC TCTATGCCGA TCTTTATATC CGCCCTCCCA GCGATAAAAT GCTCGAGACC
CAAGCCTTAC TCGAGAGCTT GCCTTATGTC AGCGCGGTTT ATGGCCAATG GCTTCACTCT
ACCCATTACC AAAGTGCCCC GGTCAGTTTA ATGACTCGCG ATGCCCACTC TCTGAGAAAC
AGCAATCAGA TTAAGGCGCA ACAGGCCGAC CATTGGCAAG ACTTTTTCAA CGCTAAGGTG
CTGATGATCA GCGAGCCGAT GGCAATCAAG TATCGACTCA ATATAGGCGA CACGATCGCC
CTACCTGAGT TTGATAATGC CTCGCTTCCC GCTTTGCCAA TTGGCGCTAT TTTTTATGAT
TACGGCAGCC CAAAAGGACA GGTAATCATC AGCCAAACTA CCTGGCAGCA GCTAGATTTA
CCCGTCCCCC CAAGCAGTAT TGCGGCCGAT TATGATAACA AGATTAGCGA GCTAGAATCG
ATACTGCAGA ATCAGATTCC GCTGTCTGCG GCGCAGATGT ATAACCAGAG CAAGATTAAA
CAACGAGCCA TGCAGATTTT TAAACGCACC TTCTCCATCA CCTTAGTGCT CAATAGCTTA
ACGCTTCTCG TCGCTGCAGT GGGCCTATTC AGCGCTTGCT TGATGCTAAC TCAAGCGAGA
CAGGCTCCAC TCGCCAGACT GTATGCTCTG GGCGTCAGCC GAATGCAATT GCGAACCTTA
GTGTCTGGGC AGATGTTGTT AATCGTACTA CTGACCTGTT TGCTCGCCCT ACCAACTGGT
GCGATCCTCG GTTACCTGTT AATTAATAAA GTCACCCTGC AGGCCTTTGG TTGGAGTATC
GCCATGGTTT GGGACTGGCT GGCTTATTTC AGGGTATTGG TGATCGCCCT CGTTGTCAGT
GCCTTCGCCG TGGTTCTGCC GCTACTATGG CAGACACGCC GCCCATTGAT CAGCAGCTTG
CAGCAGGAGG CATTATGA
|
|---|
| Protein sequence | MSSPVRRQHG LTIRLSLGVF ARHYLKSPLQ AGAIILGVIL AVTLLIGVRA TNENAVRSYS
EATELLSQRA QLLLTPISGQ KSVDESVYFT LRQAGITQAL AVLTGTVTDD QGQRWDIQAS
DLVAALSIQA KQSTPKHAAT GSKELSLFSA DLPLAKLLSG APYILMSESF SAQVAPQGTI
ELNGCQLNVI SLSDELGLSN AILMDISLGQ KLLNQAGELS YIALFANPNH LTKQIQKLFN
QQTRQHFIFT LQDDGEGLTS LTRSFHLNLT AMSLLAFIVG LFIAYNGVRY SLLKRQKLLV
QLQQQGVPQR ALLLALLFEL LILVLIGSLV GFILGLQLSH WLQPMIALTL EQLYGARLMP
GAWQWSWLYQ AIGLTLFAAL LACYPLFNTL AKQPLARCAS RFEQLVHAKK QQLRLFFIGL
ILLTVAAGLF PLTQDYQHSL ALIGVVTIAM PLLLPMVLQV SLSLVERVAQ TGLWQYAVAE
SKELIAPLSL AMMAMLLALT ANISMNTLVG SFEITLKHWL DDRLYADLYI RPPSDKMLET
QALLESLPYV SAVYGQWLHS THYQSAPVSL MTRDAHSLRN SNQIKAQQAD HWQDFFNAKV
LMISEPMAIK YRLNIGDTIA LPEFDNASLP ALPIGAIFYD YGSPKGQVII SQTTWQQLDL
PVPPSSIAAD YDNKISELES ILQNQIPLSA AQMYNQSKIK QRAMQIFKRT FSITLVLNSL
TLLVAAVGLF SACLMLTQAR QAPLARLYAL GVSRMQLRTL VSGQMLLIVL LTCLLALPTG
AILGYLLINK VTLQAFGWSI AMVWDWLAYF RVLVIALVVS AFAVVLPLLW QTRRPLISSL
QQEAL
|
|---|
| |