Gene Spea_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0606 
Symbol 
ID5661006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp748187 
End bp749431 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content48% 
IMG OID641235152 
Productsodium/hydrogen exchanger 
Protein accessionYP_001500469 
Protein GI157960435 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTTC TATATTTAGT TCTTGTATTA CTTACAGTTA CCAGAATATT TGCAATTCTA 
GCCAAACGCT TAAACTTACC GCCGATAGTG GGGGAATTAG TGTCGGGGAT CGCGCTAGGG
CTATTTCTGC ACCGCTTTCA AGACTCATTT CCCCTGCTAT GGCAGGTAAC CCAAGGTGAA
GCGTTTGAGG CGCTGGCCGA TCTGGGGATG TTTTTCCTTA TGCTACTCGC AGGTGTGCGC
ATGAGTCCCT TGGATTTTAA AAAGACCTCA GGTTCAGCAC CCGCTGTGGC TATCGGTGGC
ATGTTAGTGC CAATTATTGC AGGCACTATA ATTGGACTGA TGCTGTTTCC TGAATCCCCC
TTCAAGACAA TTCAGAGCTG GTTCTTAGGT ACCGCCTTAG CCGTTACTGC CGTACCGGTA
ACCATTCGTA TGCTGATGGA GTTTAATCGC TTAGATACAG AAGAAGGGAG GACTATTATC
GCCGCAGCAC TTTGGGACGA CTTGTTAAGT CTATTTATCC TCGCACTGTT ATTAGCTGCA
ATAAGCAATG GTGGAACGCT CTCTTTTTCC TTTGACTTAT GGGGGACCCT GTTGGCTAAG
GTGCTACTGT TTTTCGCTAT TACCATCCCA GCCGGTTATT ACTTGTTTCC CCTTGTAGGT
CGTTACCTCA AACTCACAAA TATTCCTGAT ATCGATTTTA GTATGTTGTT AATCGCCTCT
CTAGCATACG CTGTACTCGC AGAAGTATTG GGGCTGCATT TCATTATTGG TGCCTTTGTC
GCAGGTATGT TCTTTCACCC CGCCGTAGTG GAGCAAGAGA TCTATGACCG AGTAGAGGGG
CAAACATCAG GTATTACATC GGGTTTCCTT GCGCCGATTT TTTTCGTATC GATAGGCTTT
CACCTCAACT TAACCGCTCT TATCTCTATT CCAGGCTTTG TCGCGCTACT CGTTACCGTT
GCCTTACTCA GTAAGCTTAT TGGCGCCGGA TTCTGTGCCC GCGCTACAGG GCATAGTACT
CAAGAGTCTC TGCGGATCGG AGTCGCGATG AGTGGCCGAG GGGCTGTAGA GATAGTATTG
GCAGGCGTTG CATTGCAGGC AGGACTCTTC AACCACCCTG ATCCTACGCC GCCTATTATA
GCCGGGCTAT TTTCCGCCAT AGTGATCATG GCAATAGCGA CCAGTATTAT TACCCCGCTG
CTATTAGCCT TTTTAATTCG CCTTCACGGG GTCGATAAAC AATAA
 
Protein sequence
MRFLYLVLVL LTVTRIFAIL AKRLNLPPIV GELVSGIALG LFLHRFQDSF PLLWQVTQGE 
AFEALADLGM FFLMLLAGVR MSPLDFKKTS GSAPAVAIGG MLVPIIAGTI IGLMLFPESP
FKTIQSWFLG TALAVTAVPV TIRMLMEFNR LDTEEGRTII AAALWDDLLS LFILALLLAA
ISNGGTLSFS FDLWGTLLAK VLLFFAITIP AGYYLFPLVG RYLKLTNIPD IDFSMLLIAS
LAYAVLAEVL GLHFIIGAFV AGMFFHPAVV EQEIYDRVEG QTSGITSGFL APIFFVSIGF
HLNLTALISI PGFVALLVTV ALLSKLIGAG FCARATGHST QESLRIGVAM SGRGAVEIVL
AGVALQAGLF NHPDPTPPII AGLFSAIVIM AIATSIITPL LLAFLIRLHG VDKQ