Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0606 |
Symbol | |
ID | 5661006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 748187 |
End bp | 749431 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641235152 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_001500469 |
Protein GI | 157960435 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTTTC TATATTTAGT TCTTGTATTA CTTACAGTTA CCAGAATATT TGCAATTCTA GCCAAACGCT TAAACTTACC GCCGATAGTG GGGGAATTAG TGTCGGGGAT CGCGCTAGGG CTATTTCTGC ACCGCTTTCA AGACTCATTT CCCCTGCTAT GGCAGGTAAC CCAAGGTGAA GCGTTTGAGG CGCTGGCCGA TCTGGGGATG TTTTTCCTTA TGCTACTCGC AGGTGTGCGC ATGAGTCCCT TGGATTTTAA AAAGACCTCA GGTTCAGCAC CCGCTGTGGC TATCGGTGGC ATGTTAGTGC CAATTATTGC AGGCACTATA ATTGGACTGA TGCTGTTTCC TGAATCCCCC TTCAAGACAA TTCAGAGCTG GTTCTTAGGT ACCGCCTTAG CCGTTACTGC CGTACCGGTA ACCATTCGTA TGCTGATGGA GTTTAATCGC TTAGATACAG AAGAAGGGAG GACTATTATC GCCGCAGCAC TTTGGGACGA CTTGTTAAGT CTATTTATCC TCGCACTGTT ATTAGCTGCA ATAAGCAATG GTGGAACGCT CTCTTTTTCC TTTGACTTAT GGGGGACCCT GTTGGCTAAG GTGCTACTGT TTTTCGCTAT TACCATCCCA GCCGGTTATT ACTTGTTTCC CCTTGTAGGT CGTTACCTCA AACTCACAAA TATTCCTGAT ATCGATTTTA GTATGTTGTT AATCGCCTCT CTAGCATACG CTGTACTCGC AGAAGTATTG GGGCTGCATT TCATTATTGG TGCCTTTGTC GCAGGTATGT TCTTTCACCC CGCCGTAGTG GAGCAAGAGA TCTATGACCG AGTAGAGGGG CAAACATCAG GTATTACATC GGGTTTCCTT GCGCCGATTT TTTTCGTATC GATAGGCTTT CACCTCAACT TAACCGCTCT TATCTCTATT CCAGGCTTTG TCGCGCTACT CGTTACCGTT GCCTTACTCA GTAAGCTTAT TGGCGCCGGA TTCTGTGCCC GCGCTACAGG GCATAGTACT CAAGAGTCTC TGCGGATCGG AGTCGCGATG AGTGGCCGAG GGGCTGTAGA GATAGTATTG GCAGGCGTTG CATTGCAGGC AGGACTCTTC AACCACCCTG ATCCTACGCC GCCTATTATA GCCGGGCTAT TTTCCGCCAT AGTGATCATG GCAATAGCGA CCAGTATTAT TACCCCGCTG CTATTAGCCT TTTTAATTCG CCTTCACGGG GTCGATAAAC AATAA
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Protein sequence | MRFLYLVLVL LTVTRIFAIL AKRLNLPPIV GELVSGIALG LFLHRFQDSF PLLWQVTQGE AFEALADLGM FFLMLLAGVR MSPLDFKKTS GSAPAVAIGG MLVPIIAGTI IGLMLFPESP FKTIQSWFLG TALAVTAVPV TIRMLMEFNR LDTEEGRTII AAALWDDLLS LFILALLLAA ISNGGTLSFS FDLWGTLLAK VLLFFAITIP AGYYLFPLVG RYLKLTNIPD IDFSMLLIAS LAYAVLAEVL GLHFIIGAFV AGMFFHPAVV EQEIYDRVEG QTSGITSGFL APIFFVSIGF HLNLTALISI PGFVALLVTV ALLSKLIGAG FCARATGHST QESLRIGVAM SGRGAVEIVL AGVALQAGLF NHPDPTPPII AGLFSAIVIM AIATSIITPL LLAFLIRLHG VDKQ
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