| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0604 |
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| Symbol | |
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| ID | 5661004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 742513 |
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| End bp | 743424 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235150 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001500467 |
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| Protein GI | 157960433 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGATT TAAACGGTAT GATGCTCTTT GCGGCGGTAG TTAGAGCCAA AGGTTTCTCT
CAAGCTGCCC GTGAAATAGG CATGCCAAAA TCAACCATTA GTCGTAAGGT TGCCCAGCTA
GAAGAGCAGC TTGGCGTGCG ACTATTGCAG CGAGATACCC GTAATCTAAG TTTGACTCAG
GTCGGTGCGC TGTTTTTTCA GCATTGCTCC AGTATAAGCG ATGAAATTGA AGCTGCAAAA
GCCACTGTGG AAAATACCCA TAACGATGTC TCAGGCCTGT TGCGTATCGC GATTCCAGTC
TCTTTCAGTC AAGAGCTAAT CGCCACCTTG TGTAGCGGTT TTCTGCGCCT CTATCCCAAT
ATCGAGTTAG ATGTGCAGTT TACCGATAGT GATGTAGGAC TCGTTGGGGA AGGCTATGAT
ATCGCTATCA AATACGGTCC ACTGCAATCA TCGGATCTTG TCGCCAGACT GCTATTTGAA
CGCCAACCCA TATTGGTCGC AAGTCCCGGC TACCTGAAAA TTCATGGTAC ACCTGCCACA
CCTCAAGATT TAGCCGAACA CAGCGGTATT TTGCTGGGAA CCTCTCGCTC GGCGCCAATC
TGGCCCCTAG GCAAAGGCGC CAGAAAAACC ATGGTTAACT TCCAGCGTAA GGTTCGAGTC
AATAGTGCTG TGATGGTTAA ACAGTTGGTG ATGGATGATT TTGGCATTGC CATGCTGTCT
AATTCAGTGT GTAAGAACGA ACTGGCGAGT GGCTCTTTGG TGCCCATTCT ACAAGAGTGG
CCGATGGAAG CGTTTAAGGT ATATGGCGTG TATTCAAGCA GACGTCAACT AGCGACTAAT
ATCAGTGTAT TTTTGGATTT CTTTCATAAG CGTTTCACCA ACCAAGAATC CTTACAATCT
ATGATGATGT AG
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| Protein sequence | MPDLNGMMLF AAVVRAKGFS QAAREIGMPK STISRKVAQL EEQLGVRLLQ RDTRNLSLTQ
VGALFFQHCS SISDEIEAAK ATVENTHNDV SGLLRIAIPV SFSQELIATL CSGFLRLYPN
IELDVQFTDS DVGLVGEGYD IAIKYGPLQS SDLVARLLFE RQPILVASPG YLKIHGTPAT
PQDLAEHSGI LLGTSRSAPI WPLGKGARKT MVNFQRKVRV NSAVMVKQLV MDDFGIAMLS
NSVCKNELAS GSLVPILQEW PMEAFKVYGV YSSRRQLATN ISVFLDFFHK RFTNQESLQS
MMM
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