Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0601 |
Symbol | |
ID | 5661001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 739231 |
End bp | 739983 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641235147 |
Product | deoxyribonuclease I |
Protein accession | YP_001500464 |
Protein GI | 157960430 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2356] Endonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCC GTTTATTTTG TGCAGGGCTA ATCACAGTTT TTTCCCTACC TACATTTGCT CAATCTTACC AAGGTAATAC AAGCATTCAT TCATTTAATA AGGCCAAAAA AACCTTAGAG CGACAAGTCT ATCATGACCA CCGTATCACG CTTTATTGTG ATGCTAAGTT CGATAAAAAT AAGAACATTA CCCTGCCAAA TGGCTTTACC ACTGAAAAAC ATGTTAAGCG CGCTAAACGT GTGGAATGGG AACATGTGGT ACCAGCAGAA AACTTCGGAC GCACGTTTTC AGAATGGCGT GAGGGTCACG ACAGTTGTGT GAACAATAAA GGTAAGAATT TTAAAGGCCG AAAATGTGCT GAAAAAATGA ATAATGAATA TCGATTAATG CAGTCGGACC TGTATAACTT GTATCCGGCA GTGGGCGCTG TAAATGCCAC GAGATCGAAT TATAACTTTG CCATGTTGCC TTCTTCACGC TCTAGTTTTG GGGTATGTGA AGTGAAAGTG CAAGGTAGGA AAGTAGAGCC GACAGTCGGT TCTAGAGGGC GAATAGCACG AACCTATTTA TATATGGAGC AAGCATACCC TCGATTTCGT TTGAGTAATC AACAGAAGCA ACTAATGAAC GCTTGGGATA AGCAATTTCC AGTCAGCGAA TGGGAATGTG AACGCGCTAA ACGCATCGAG CGTATTCAAA AGAACAGGAA CCATATCGTT TTTGAACGAT GCGAGGCATT AAAAGCGAAA TAG
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Protein sequence | MKIRLFCAGL ITVFSLPTFA QSYQGNTSIH SFNKAKKTLE RQVYHDHRIT LYCDAKFDKN KNITLPNGFT TEKHVKRAKR VEWEHVVPAE NFGRTFSEWR EGHDSCVNNK GKNFKGRKCA EKMNNEYRLM QSDLYNLYPA VGAVNATRSN YNFAMLPSSR SSFGVCEVKV QGRKVEPTVG SRGRIARTYL YMEQAYPRFR LSNQQKQLMN AWDKQFPVSE WECERAKRIE RIQKNRNHIV FERCEALKAK
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