Gene Spea_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0601 
Symbol 
ID5661001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp739231 
End bp739983 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content41% 
IMG OID641235147 
Productdeoxyribonuclease I 
Protein accessionYP_001500464 
Protein GI157960430 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCC GTTTATTTTG TGCAGGGCTA ATCACAGTTT TTTCCCTACC TACATTTGCT 
CAATCTTACC AAGGTAATAC AAGCATTCAT TCATTTAATA AGGCCAAAAA AACCTTAGAG
CGACAAGTCT ATCATGACCA CCGTATCACG CTTTATTGTG ATGCTAAGTT CGATAAAAAT
AAGAACATTA CCCTGCCAAA TGGCTTTACC ACTGAAAAAC ATGTTAAGCG CGCTAAACGT
GTGGAATGGG AACATGTGGT ACCAGCAGAA AACTTCGGAC GCACGTTTTC AGAATGGCGT
GAGGGTCACG ACAGTTGTGT GAACAATAAA GGTAAGAATT TTAAAGGCCG AAAATGTGCT
GAAAAAATGA ATAATGAATA TCGATTAATG CAGTCGGACC TGTATAACTT GTATCCGGCA
GTGGGCGCTG TAAATGCCAC GAGATCGAAT TATAACTTTG CCATGTTGCC TTCTTCACGC
TCTAGTTTTG GGGTATGTGA AGTGAAAGTG CAAGGTAGGA AAGTAGAGCC GACAGTCGGT
TCTAGAGGGC GAATAGCACG AACCTATTTA TATATGGAGC AAGCATACCC TCGATTTCGT
TTGAGTAATC AACAGAAGCA ACTAATGAAC GCTTGGGATA AGCAATTTCC AGTCAGCGAA
TGGGAATGTG AACGCGCTAA ACGCATCGAG CGTATTCAAA AGAACAGGAA CCATATCGTT
TTTGAACGAT GCGAGGCATT AAAAGCGAAA TAG
 
Protein sequence
MKIRLFCAGL ITVFSLPTFA QSYQGNTSIH SFNKAKKTLE RQVYHDHRIT LYCDAKFDKN 
KNITLPNGFT TEKHVKRAKR VEWEHVVPAE NFGRTFSEWR EGHDSCVNNK GKNFKGRKCA
EKMNNEYRLM QSDLYNLYPA VGAVNATRSN YNFAMLPSSR SSFGVCEVKV QGRKVEPTVG
SRGRIARTYL YMEQAYPRFR LSNQQKQLMN AWDKQFPVSE WECERAKRIE RIQKNRNHIV
FERCEALKAK