Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0600 |
Symbol | |
ID | 5661000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 738034 |
End bp | 738765 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641235146 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001500463 |
Protein GI | 157960429 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.604988 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGTGC CAAGAATCTA TCAACAATCA ACATTAGTTG TCGGCCAATC GGTCGCATTA GATGATGAAG CGGCAGGTCA TGTTGGCCGC GTATTAAGAA TGTCTTCAGG TGAGCAGGTT AGCTTGTTCA ATGGTGACGG CAATGACTAT CTTGCTGAGA TTATTAGCGC TAGTAAGAAA AACGTCGAAG TTAAGGTCCT CTCATGCGAG GCAAATGATA GCGAATCGCC ACTTAACTTA CATTTAGGCC AAGTGATCTC TCGTGGCGAT AGAATGGATT TCACCATTCA AAAGTCGGTT GAGCTGGGCG TGAACACCAT CACGCCACTG TTTTCAGAGC GCTGTGGGGT CAAATTAACT GGCGAGCGTT TAGATAAAAA AATTCAACAA TGGCAAAAGA TTGTCATTAG CGCCTGCGAG CAATCTGGCC GTAGTGTGGT GCCGGTTATC CGCCCTGCGA TGCAACTTAG CGATTGGTGT GCTGAAGATT CTGACGCGGT GAAATTGAAC CTGCATCCGC GAGCCTCACA CGGTGTTAAC GGGCTGACAC TGCCTAATAA CCGTGTCAGA TTGGTTATTG GGCCAGAAGG TGGTTTATCA GCGCCAGAAA TCGCCATGAC CGAAGAGCAC CAATTTACCG ACGTACTGCT TGGCCCACGA GTACTGCGCA CAGAAACCGC AGCGCTCACC ACCATTAGCG CTTTGCAGCT AAAATTTGGT GATATCGGCT AA
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Protein sequence | MRVPRIYQQS TLVVGQSVAL DDEAAGHVGR VLRMSSGEQV SLFNGDGNDY LAEIISASKK NVEVKVLSCE ANDSESPLNL HLGQVISRGD RMDFTIQKSV ELGVNTITPL FSERCGVKLT GERLDKKIQQ WQKIVISACE QSGRSVVPVI RPAMQLSDWC AEDSDAVKLN LHPRASHGVN GLTLPNNRVR LVIGPEGGLS APEIAMTEEH QFTDVLLGPR VLRTETAALT TISALQLKFG DIG
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