| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0589 |
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| Symbol | |
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| ID | 5660989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 722699 |
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| End bp | 723733 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641235134 |
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| Product | porin |
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| Protein accession | YP_001500452 |
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| Protein GI | 157960418 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000486852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA CACTAATCTC TGCATCAGTG GCATCAGTTT TAACCCTAGC TTCTTTCGGC
GCGCTAGCCG ATGGTCCAGG CTTTTACGGT CGTCTAGACC TATCTGCTAC ACACTCTGAT
ACTGGTGCAA CGACACAAAA CGGTAAAGAA GGCGCTATTT TAGAGAACAA CTTCTCTCAT
TTAGGTGTTA AAGGCAGCGA AAATATCGCT GACGGTTATG ACATCGTTTA CCAAATGGAG
TTTGGTGTTG ACAACACTTC TAACAGCAAC AAGACATTCA CTACTCGTAA CACTTTCCTA
GGTCTAAAAA CCAACGCTGG TACAGTACTT GTTGGCCGTA ACGATCACGT ATTTAAGCAA
ACTGAAGGTG GCGCTGATGT TTTTGGTAAC ACAAACGCCG ATATCGACCG TCTAGTTGCG
GGTCAAGACC GTGTTGGTGA TGGTATCTGG TACTACTCTC CAAAGATCGC TGGTCTAGTG
ACTTTGAACG CGACTTACCT AATGGAAGGC AACTACACTG ACGAAGCTAA CAAAACTTCT
TACGACCAAC AGTATGCGTT AAGTGCAACT ATCGGTGACA AGAAGCTTAA GGCACAGAAC
TACTATGTAG CAGCTGCTTA CAACACTATC AAGGGTATCG ATGCATACCG CGGTGTGGCT
CAAGTTAAGC TAGGTGACTT CAAAGTGGCT GGTATCTTCC AGAACACAGA AAGCCAAACA
ACAGATCAAG AAGGTAACTC TTACTTCGTA AATGTTGTTT ACAACCTAAA CGGCGTAAAC
CTAAAAGCTG AATACGGTAA AGACGAAGGC GGTTTTGGTA AGTACTACAA AAACATCACT
GGTGGTTATG AAGAAGGTGT AACTTCTGAT ATCAACGTTC AAGTGATCAC TGTAGGTGCT
GACTACAAGA TCTCTAAATC AACTATGGTA TATGGCCACT ACGCTATGTA CGAAGGTGAC
CACAAAGTTG GTACAGCAAC TAAAGATCTA GAAGACGACA ACGTATTCAC TGTTGGTGTA
CGTTACAACT TCTAA
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| Protein sequence | MKKTLISASV ASVLTLASFG ALADGPGFYG RLDLSATHSD TGATTQNGKE GAILENNFSH
LGVKGSENIA DGYDIVYQME FGVDNTSNSN KTFTTRNTFL GLKTNAGTVL VGRNDHVFKQ
TEGGADVFGN TNADIDRLVA GQDRVGDGIW YYSPKIAGLV TLNATYLMEG NYTDEANKTS
YDQQYALSAT IGDKKLKAQN YYVAAAYNTI KGIDAYRGVA QVKLGDFKVA GIFQNTESQT
TDQEGNSYFV NVVYNLNGVN LKAEYGKDEG GFGKYYKNIT GGYEEGVTSD INVQVITVGA
DYKISKSTMV YGHYAMYEGD HKVGTATKDL EDDNVFTVGV RYNF
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