| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0578 |
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| Symbol | |
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| ID | 5660978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 708196 |
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| End bp | 709617 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235123 |
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| Product | SSS family solute/sodium (Na+) symporter |
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| Protein accession | YP_001500441 |
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| Protein GI | 157960407 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4146] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.493945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACACA CTATTCAACT GGTTATATTT TTTGGCCTAA CCGCCTTGGT AGGTTTAATC
ACCTACCTAA AATGCCGCAA AGTCACCCGC GATAGCAGCG ACAGCAAAGA CTACTTTCTT
GCCGGCGGAG GCTTAAGCTG GGTAGTAGTT GCTGGCTCAT TGATGATGAC TAACATCAGC
GCCGAACAGA TAGTGGGCAT GAACGGCGCA CAAACCTTGC TAGTCGCTTG GTGGGAGATC
GCCGCGGCGG TGGGACTCAT CATACTAGCA AAATGGCTGA TCCCAATCTA TTACAAGTAT
AACTGCACCA CGACAACCGA ACTGCTTGAG CGCAAGTATC AAGACAAGGG GATCCGCGCT
ATGGTGTCGG TGCTGTTTAT GCTCGGCTAC GCCTTCATTT TATTACCTGT AGTGCTATAC
ACAGGCTCGT TATTTATGAA GTCTATGTTT GGCTTATCTA TATCAGTAAC CATGCTAGCG
ATCATTTTTG CCGTTGTCGG TGCCATCTAT GCGATTTTTG GCGGTCTAAG AGCCATAGCC
ATCTCCGATA GCCTCAACGG TATTGGTTTG CTGCTCATGG GGATCGTGGT CTCCTATCTG
GCACTCAACG CCGTCAATTG GGATCTGTCT GGCATCCCTA TCGAACGTGT CACCTTGATT
GGTGATACTC AGTCAGATAT TCCTTGGCAT ACCCTATTAA CCGGTATGAT CTTCATTCAG
ATCTTCTACT GGGGCACCAA CATGGTGATC ACCCAAAGAG CCCTAGCAGC CAAGTCAGTT
GAAGAGGCGC AAAAAGGCCT CTATGCAGCT GTAGTCATGA AGCTAATTAT TCCTATTATC
GTGGTATTAC CAGGGCTTGT GGCCTACAAA CTTTATGGTG ATGTAGGTGA TGTTGCATAC
GGCAAGCTGG TTGGTGATAT TCTACCTAGC TGGCTGTCTG GCGCCTTTGC AGCTGTGATG
GCAGGCGCAG TTTTAAGCTC ATTTAACTCT TGCCTGAACT CAGCTGCAGC GCTTTATACC
TGCGACATCC ATCAAAACTA TATCAATCCG AATGCTGATA TTCGAAAAAT TGGCACCCGA
GTAGCCTTAG TCTTTACCCT TATTTCATTG TGCTTAGTGC CGGTATTTGC CCAATCGTCT
AGTATCATCT CGCTGCTACA GCAGCTAAAT GGTCTCTACT CTATGCCAGT ACTCGCAGCC
TTTATCTGCG CCCTAGTCTT TAAGGATGTT AACGCTAAAG CGATTAAGAT TGGCCTAGTG
TTTGGCGTGC TAATGTATGC GGTGTTTACC TTCGTATGGA GTCCGCTGCA CTTTATCCAC
ATGATGGCTA TTACCTTGGC CGCCACCATA TTTGTCACCC TCGCCCTGAG TAAATATGTA
TTCGGGCCAC AGAGCATCAA TAACCAACTC GTTAGCGACT AA
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| Protein sequence | MEHTIQLVIF FGLTALVGLI TYLKCRKVTR DSSDSKDYFL AGGGLSWVVV AGSLMMTNIS
AEQIVGMNGA QTLLVAWWEI AAAVGLIILA KWLIPIYYKY NCTTTTELLE RKYQDKGIRA
MVSVLFMLGY AFILLPVVLY TGSLFMKSMF GLSISVTMLA IIFAVVGAIY AIFGGLRAIA
ISDSLNGIGL LLMGIVVSYL ALNAVNWDLS GIPIERVTLI GDTQSDIPWH TLLTGMIFIQ
IFYWGTNMVI TQRALAAKSV EEAQKGLYAA VVMKLIIPII VVLPGLVAYK LYGDVGDVAY
GKLVGDILPS WLSGAFAAVM AGAVLSSFNS CLNSAAALYT CDIHQNYINP NADIRKIGTR
VALVFTLISL CLVPVFAQSS SIISLLQQLN GLYSMPVLAA FICALVFKDV NAKAIKIGLV
FGVLMYAVFT FVWSPLHFIH MMAITLAATI FVTLALSKYV FGPQSINNQL VSD
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