Gene Spea_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0562 
SymbolmetF 
ID5660962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp690542 
End bp691432 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content48% 
IMG OID641235107 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_001500425 
Protein GI157960391 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID[TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTTTC ATCACGCACA ACATGCAACA TCATTAAACC AGAGCCTGTC TGAGCTAAAT 
GGTGATATTA ACGTTTCTTT CGAATTTTTC CCGCCTTCAA CTCCAGAGAT GGAAAAGTTA 
CTGTGGAACT CTATCCGTCG TTTAGAGCCA TTAAATCCAA AGTTTGTTTC GGTGACTTAT 
GGTGCTAACT CGGGTGTTCG TGATAGAACC CATGGCGTAA TTGAGCGTAT CCAGACTGAA 
ACAGACTTGC TGGCTGCGCC GCACCTGACT TTAGTCGATG CCAGCGATGA AGAGCTTAAA 
GAGCTGGCAA AACATTATTG GAATAGCGGG ATCCGCGATA TCGTCGCCCT GCGCGGTGAC 
TTACCAGACG GTAGCCCTAA GCCTACTCGT TTTGCTAATG ATCTTGTCCG CCTATTACGT 
TCGGTAGCCG ACTTTGATAT CTCGGTGGCA GCCTACCCAG AGGTGCATCC CGATGCGAGT 
AATGCACAGT CAGATCTGAT TAATCTTAAA AAGAAGATAG ACGCTGGTGC CAACCGCGCT 
ATCACTCAGT TTTTCTTCGA TGTGGAGTCA TATCTGCGTT TTAGAGACCG CTGCGCGGCT 
GCAGGAATCG ACGCTGAAAT CATCCCAGGG ATCTTACCTG TGACTAACTT TAATCAGACT 
AAGCGCTTTG CCGCCATGAC CAATGTGTCC ATCCCAAGCT GGTTACATCG TCAGTTTGAG 
GGGCTCGAAG ATGATGCCAT TACCCGCCAG ATGGTTGGGG CTAACGTGGC TATCGACATG 
GTCAAAGTCC TATCTCGTGA AGGAGTGAAA GACTTCCACT TCTATACGTT AAATCGCGCT 
GAGCTGACCT ATGCCATTTG TCACACATTA GGGGTTAGAC CGGGAAAGTA A
 
Protein sequence
MGFHHAQHAT SLNQSLSELN GDINVSFEFF PPSTPEMEKL LWNSIRRLEP LNPKFVSVTY 
GANSGVRDRT HGVIERIQTE TDLLAAPHLT LVDASDEELK ELAKHYWNSG IRDIVALRGD 
LPDGSPKPTR FANDLVRLLR SVADFDISVA AYPEVHPDAS NAQSDLINLK KKIDAGANRA 
ITQFFFDVES YLRFRDRCAA AGIDAEIIPG ILPVTNFNQT KRFAAMTNVS IPSWLHRQFE 
GLEDDAITRQ MVGANVAIDM VKVLSREGVK DFHFYTLNRA ELTYAICHTL GVRPGK