Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0545 |
Symbol | |
ID | 5660945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 671034 |
End bp | 671570 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641235090 |
Product | hypothetical protein |
Protein accession | YP_001500408 |
Protein GI | 157960374 |
COG category | [S] Function unknown |
COG ID | [COG3453] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCTTTA TTTTATTACT CACTAGCTTG CTTAGCCCTA TGGCGTTTGC AGCCATTACA CCGGATGCTT TACAGCAGGT AAAAGCTGTG CAGTTTAGTA GTAACAAGGT AATAACGGCA GGCTTGCCAA CGCAACCTCA ATTCAAAGTA CTTAAAGATT CTGGTGTAGA ACTAGTGATT AACTTAATCC CAAAAGATAA TCCTACTGGT TATGCCAATG AAGCAGAGCT AGTTAAACAA GCTGGCATGG ACTACGAGCA AATTGATGTG GACTGGAAAC AGCCTACTGT TGCAAATGTT CAACAGTTTT TTGCCATAAT GGACGCTAAC CAAGACAAAG ATATTTTAGT GCACTGCGCA GCCAACTTCC GCGCATCGGC ATTTTATTAT CTGTATCAGT TAAAACGCGG CCAAAGCGAC TCATTGGCTT ACCAACAACA AGTCATGGCA CCATGGGGAG AGCTTTCAAA AAGCTTAAAA GAGTATCCCC AATGGCAGGT ACTTATTGAT CAGGTGAAGT CTGACATAGA CCAATAG
|
Protein sequence | MRFILLLTSL LSPMAFAAIT PDALQQVKAV QFSSNKVITA GLPTQPQFKV LKDSGVELVI NLIPKDNPTG YANEAELVKQ AGMDYEQIDV DWKQPTVANV QQFFAIMDAN QDKDILVHCA ANFRASAFYY LYQLKRGQSD SLAYQQQVMA PWGELSKSLK EYPQWQVLID QVKSDIDQ
|
| |