Gene Spea_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0545 
Symbol 
ID5660945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp671034 
End bp671570 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content42% 
IMG OID641235090 
Producthypothetical protein 
Protein accessionYP_001500408 
Protein GI157960374 
COG category[S] Function unknown 
COG ID[COG3453] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTTA TTTTATTACT CACTAGCTTG CTTAGCCCTA TGGCGTTTGC AGCCATTACA 
CCGGATGCTT TACAGCAGGT AAAAGCTGTG CAGTTTAGTA GTAACAAGGT AATAACGGCA
GGCTTGCCAA CGCAACCTCA ATTCAAAGTA CTTAAAGATT CTGGTGTAGA ACTAGTGATT
AACTTAATCC CAAAAGATAA TCCTACTGGT TATGCCAATG AAGCAGAGCT AGTTAAACAA
GCTGGCATGG ACTACGAGCA AATTGATGTG GACTGGAAAC AGCCTACTGT TGCAAATGTT
CAACAGTTTT TTGCCATAAT GGACGCTAAC CAAGACAAAG ATATTTTAGT GCACTGCGCA
GCCAACTTCC GCGCATCGGC ATTTTATTAT CTGTATCAGT TAAAACGCGG CCAAAGCGAC
TCATTGGCTT ACCAACAACA AGTCATGGCA CCATGGGGAG AGCTTTCAAA AAGCTTAAAA
GAGTATCCCC AATGGCAGGT ACTTATTGAT CAGGTGAAGT CTGACATAGA CCAATAG
 
Protein sequence
MRFILLLTSL LSPMAFAAIT PDALQQVKAV QFSSNKVITA GLPTQPQFKV LKDSGVELVI 
NLIPKDNPTG YANEAELVKQ AGMDYEQIDV DWKQPTVANV QQFFAIMDAN QDKDILVHCA
ANFRASAFYY LYQLKRGQSD SLAYQQQVMA PWGELSKSLK EYPQWQVLID QVKSDIDQ