Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0543 |
Symbol | mepA |
ID | 5660943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 667460 |
End bp | 668344 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641235088 |
Product | penicillin-insensitive murein endopeptidase |
Protein accession | YP_001500406 |
Protein GI | 157960372 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3770] Murein endopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGTGA GTCAGTTGCG AGCCTTGGGC TGGCAAGCCA TGCTCCTGAG TCTGCTTGTT TGCTTAATCC TGTTTGTGGC TCCTAAGCTA CAGGCTAATG AGTGGGAGTC GGTAGAGACG CCTTATGCGA GTCACGCCAG TGCCATTGGC GGTTATGCTA ATGGCTGTCT AACAGGCGCT CAGACTTTAC CTCTAGATGG AGAAGGCTAT CAAGTTATCC GCCCTCAGCG ACAGAGATAC TACGGCCATC CGGCGCTTAT CGAATTTATT CAGCAGTTTG CCGCGAGTCT CAATCGGCAG GGGAGTGATG ATATTTTAAT TGCTGATATG TCTATGCCAA GGGGAGGCAA CTTCACTTAC GGCCACAGCA GCCATCAGAT AGGGTTAGAT GTCGACGTTT GGTTCAAGCA AGCGAATCAG CCGCTAACTT CAGAGGAGCG AGCACAACCA ATAGCGCTAA AACTCGTTGA TAAGAAGCGG TTTGCACTCG ACACTCAGTT ATGGTCGAAG CTGCAGACGC AGATGATTAA GATAGCGGCA CTGGATGAGC GAGTGGCACG AATTTTTGTC AGTCCAGTGA TAAAGCAGCA CCTGTGCGAT TTAAGGCTAG AGAATGATAC CTGGCTTAAT AAGGTAAGGC CTTGGTGGGG GCATACTTAT CATATGCATG TCAGGCTGAG TTGCCCTAAA GACAATCCGC TCTGTCGGGA TCAAGCTAGC ATACCCGTTG GCAATGGTTG TCATGAGCTT GGCTGGTGGA AGCGTCAGTT GACGCAAACT CAGACTACTC AAGCTGCCAA GGCTAACAAG CCCGCCAGCA AGCCTAAAAA GAAAAAAGCC AAGGTTAAAC CTGAGCAGTG CTCGCGAATG ATTGCAGCCA AATAA
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Protein sequence | MIVSQLRALG WQAMLLSLLV CLILFVAPKL QANEWESVET PYASHASAIG GYANGCLTGA QTLPLDGEGY QVIRPQRQRY YGHPALIEFI QQFAASLNRQ GSDDILIADM SMPRGGNFTY GHSSHQIGLD VDVWFKQANQ PLTSEERAQP IALKLVDKKR FALDTQLWSK LQTQMIKIAA LDERVARIFV SPVIKQHLCD LRLENDTWLN KVRPWWGHTY HMHVRLSCPK DNPLCRDQAS IPVGNGCHEL GWWKRQLTQT QTTQAAKANK PASKPKKKKA KVKPEQCSRM IAAK
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